Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC11.04□□□□□ -0.64
LINC01561Q8N1V8 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC11.04□□□□□ -0.64
LINC01561Q8N1V8 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC11.04□□□□□ -0.64
LINC01561Q8N1V8 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01561Q8N1V8 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC11.03□□□□□ -0.64
LINC01561Q8N1V8 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC11.03□□□□□ -0.64
LINC01561Q8N1V8 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
LINC01561Q8N1V8 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01561Q8N1V8 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01561Q8N1V8 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01561Q8N1V8 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01561Q8N1V8 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01561Q8N1V8 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01561Q8N1V8 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC11.03□□□□□ -0.64
LINC01561Q8N1V8 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC11.03□□□□□ -0.64
LINC01561Q8N1V8 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01561Q8N1V8 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC11.03□□□□□ -0.64
LINC01561Q8N1V8 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01561Q8N1V8 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC11.03□□□□□ -0.64
LINC01561Q8N1V8 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01561Q8N1V8 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01561Q8N1V8 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01561Q8N1V8 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01561Q8N1V8 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01561Q8N1V8 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01561Q8N1V8 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01561Q8N1V8 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC11.03□□□□□ -0.64
LINC01561Q8N1V8 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01561Q8N1V8 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01561Q8N1V8 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01561Q8N1V8 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC11.03□□□□□ -0.64
LINC01561Q8N1V8 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01561Q8N1V8 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC11.03□□□□□ -0.64
LINC01561Q8N1V8 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01561Q8N1V8 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
LINC01561Q8N1V8 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC11.03□□□□□ -0.64
LINC01561Q8N1V8 ISCU-203ENST00000431221 799 ntTSL 2 BASIC11.03□□□□□ -0.64
LINC01561Q8N1V8 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01561Q8N1V8 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01561Q8N1V8 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC11.03□□□□□ -0.64
LINC01561Q8N1V8 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
LINC01561Q8N1V8 RNF151-202ENST00000569210 853 ntTSL 2 BASIC11.03□□□□□ -0.64
LINC01561Q8N1V8 MTDHP4-201ENST00000600287 670 ntBASIC11.03□□□□□ -0.64
LINC01561Q8N1V8 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01561Q8N1V8 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01561Q8N1V8 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC11.03□□□□□ -0.64
LINC01561Q8N1V8 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
LINC01561Q8N1V8 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01561Q8N1V8 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01561Q8N1V8 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01561Q8N1V8 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
LINC01561Q8N1V8 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01561Q8N1V8 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01561Q8N1V8 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01561Q8N1V8 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01561Q8N1V8 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01561Q8N1V8 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC11.03□□□□□ -0.64
LINC01561Q8N1V8 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC11.03□□□□□ -0.64
LINC01561Q8N1V8 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01561Q8N1V8 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC11.03□□□□□ -0.64
LINC01561Q8N1V8 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01561Q8N1V8 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01561Q8N1V8 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
LINC01561Q8N1V8 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01561Q8N1V8 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
LINC01561Q8N1V8 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01561Q8N1V8 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
LINC01561Q8N1V8 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
LINC01561Q8N1V8 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01561Q8N1V8 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
LINC01561Q8N1V8 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01561Q8N1V8 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
LINC01561Q8N1V8 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01561Q8N1V8 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC11.03□□□□□ -0.64
LINC01561Q8N1V8 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01561Q8N1V8 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01561Q8N1V8 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
LINC01561Q8N1V8 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01561Q8N1V8 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC11.02□□□□□ -0.64
LINC01561Q8N1V8 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
LINC01561Q8N1V8 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
LINC01561Q8N1V8 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
LINC01561Q8N1V8 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.64
LINC01561Q8N1V8 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC11.02□□□□□ -0.64
LINC01561Q8N1V8 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC11.02□□□□□ -0.64
LINC01561Q8N1V8 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
LINC01561Q8N1V8 AC010491.1-201ENST00000563101 2797 ntBASIC11.02□□□□□ -0.64
LINC01561Q8N1V8 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
LINC01561Q8N1V8 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
LINC01561Q8N1V8 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
LINC01561Q8N1V8 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC11.02□□□□□ -0.64
LINC01561Q8N1V8 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC01561Q8N1V8 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
LINC01561Q8N1V8 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC01561Q8N1V8 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC01561Q8N1V8 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC01561Q8N1V8 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
LINC01561Q8N1V8 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC01561Q8N1V8 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
LINC01561Q8N1V8 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms