Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC19.26■□□□□ 0.67
CCDC83Q8IWF9 AP003680.1-201ENST00000598970 3660 ntBASIC19.26■□□□□ 0.67
CCDC83Q8IWF9 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC83Q8IWF9 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC83Q8IWF9 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC83Q8IWF9 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC19.26■□□□□ 0.67
CCDC83Q8IWF9 HLA-DQB2-231ENST00000435145 2026 ntBASIC19.26■□□□□ 0.67
CCDC83Q8IWF9 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC83Q8IWF9 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CCDC83Q8IWF9 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CCDC83Q8IWF9 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC83Q8IWF9 CASK-202ENST00000378158 3848 ntTSL 5 BASIC19.26■□□□□ 0.67
CCDC83Q8IWF9 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC83Q8IWF9 PMS2P4-201ENST00000412466 1052 ntBASIC19.26■□□□□ 0.67
CCDC83Q8IWF9 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC83Q8IWF9 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC83Q8IWF9 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC83Q8IWF9 MIR3909-201ENST00000579518 119 ntBASIC19.26■□□□□ 0.67
CCDC83Q8IWF9 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC19.26■□□□□ 0.67
CCDC83Q8IWF9 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC83Q8IWF9 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC19.26■□□□□ 0.67
CCDC83Q8IWF9 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC19.26■□□□□ 0.67
CCDC83Q8IWF9 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC83Q8IWF9 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC83Q8IWF9 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC83Q8IWF9 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC83Q8IWF9 HLA-A-201ENST00000376802 1334 ntBASIC19.25■□□□□ 0.67
CCDC83Q8IWF9 AP005117.1-202ENST00000581724 1908 ntBASIC19.25■□□□□ 0.67
CCDC83Q8IWF9 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
CCDC83Q8IWF9 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC83Q8IWF9 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC83Q8IWF9 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC83Q8IWF9 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CCDC83Q8IWF9 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC83Q8IWF9 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC83Q8IWF9 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CCDC83Q8IWF9 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC83Q8IWF9 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC19.25■□□□□ 0.67
CCDC83Q8IWF9 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CCDC83Q8IWF9 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CCDC83Q8IWF9 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC83Q8IWF9 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC83Q8IWF9 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC83Q8IWF9 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC19.25■□□□□ 0.67
CCDC83Q8IWF9 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC19.25■□□□□ 0.67
CCDC83Q8IWF9 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC83Q8IWF9 PP7080-204ENST00000510714 601 ntTSL 3 BASIC19.25■□□□□ 0.67
CCDC83Q8IWF9 AC096734.2-201ENST00000562054 433 ntBASIC19.25■□□□□ 0.67
CCDC83Q8IWF9 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC19.25■□□□□ 0.67
CCDC83Q8IWF9 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CCDC83Q8IWF9 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC19.25■□□□□ 0.67
CCDC83Q8IWF9 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC83Q8IWF9 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC19.25■□□□□ 0.67
CCDC83Q8IWF9 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC83Q8IWF9 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC83Q8IWF9 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC83Q8IWF9 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CCDC83Q8IWF9 ACE-203ENST00000413513 2237 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC83Q8IWF9 RELA-227ENST00000615805 2236 ntTSL 5 BASIC19.25■□□□□ 0.67
CCDC83Q8IWF9 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC83Q8IWF9 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC83Q8IWF9 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC83Q8IWF9 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CCDC83Q8IWF9 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CCDC83Q8IWF9 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC83Q8IWF9 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC83Q8IWF9 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC83Q8IWF9 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC83Q8IWF9 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC83Q8IWF9 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC83Q8IWF9 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CCDC83Q8IWF9 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC83Q8IWF9 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC19.24■□□□□ 0.67
CCDC83Q8IWF9 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC83Q8IWF9 VMO1-203ENST00000416307 712 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC83Q8IWF9 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC19.24■□□□□ 0.67
CCDC83Q8IWF9 RHOQP3-201ENST00000437982 621 ntBASIC19.24■□□□□ 0.67
CCDC83Q8IWF9 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC83Q8IWF9 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC83Q8IWF9 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
CCDC83Q8IWF9 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC19.24■□□□□ 0.67
CCDC83Q8IWF9 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CCDC83Q8IWF9 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC19.24■□□□□ 0.67
CCDC83Q8IWF9 AC092919.2-201ENST00000623631 1645 ntBASIC19.24■□□□□ 0.67
CCDC83Q8IWF9 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC83Q8IWF9 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC83Q8IWF9 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CCDC83Q8IWF9 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CCDC83Q8IWF9 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
CCDC83Q8IWF9 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC83Q8IWF9 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC19.24■□□□□ 0.67
CCDC83Q8IWF9 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC83Q8IWF9 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC83Q8IWF9 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC83Q8IWF9 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC19.23■□□□□ 0.67
CCDC83Q8IWF9 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CCDC83Q8IWF9 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CCDC83Q8IWF9 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CCDC83Q8IWF9 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC83Q8IWF9 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms