Protein–RNA interactions for Protein: Q8IVN8

SBSPON, Somatomedin-B and thrombospondin type-1 domain-containing protein, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBSPONQ8IVN8 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SBSPONQ8IVN8 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SBSPONQ8IVN8 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SBSPONQ8IVN8 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SBSPONQ8IVN8 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
SBSPONQ8IVN8 EGFEM1P-202ENST00000431685 1563 ntBASIC12.19□□□□□ -0.46
SBSPONQ8IVN8 AC008741.2-201ENST00000612792 3115 ntBASIC12.19□□□□□ -0.46
SBSPONQ8IVN8 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC12.19□□□□□ -0.46
SBSPONQ8IVN8 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC12.19□□□□□ -0.46
SBSPONQ8IVN8 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SBSPONQ8IVN8 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SBSPONQ8IVN8 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SBSPONQ8IVN8 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SBSPONQ8IVN8 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC12.19□□□□□ -0.46
SBSPONQ8IVN8 HNRNPA3P1-201ENST00000401429 1139 ntBASIC12.19□□□□□ -0.46
SBSPONQ8IVN8 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC12.19□□□□□ -0.46
SBSPONQ8IVN8 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SBSPONQ8IVN8 HNRNPA3P5-201ENST00000455201 833 ntBASIC12.19□□□□□ -0.46
SBSPONQ8IVN8 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC12.19□□□□□ -0.46
SBSPONQ8IVN8 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC12.19□□□□□ -0.46
SBSPONQ8IVN8 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SBSPONQ8IVN8 CR383656.12-201ENST00000549567 513 ntBASIC12.19□□□□□ -0.46
SBSPONQ8IVN8 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC12.19□□□□□ -0.46
SBSPONQ8IVN8 AL596325.1-201ENST00000563991 1082 ntBASIC12.19□□□□□ -0.46
SBSPONQ8IVN8 RARRES2P9-201ENST00000565168 469 ntBASIC12.19□□□□□ -0.46
SBSPONQ8IVN8 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
SBSPONQ8IVN8 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC12.19□□□□□ -0.46
SBSPONQ8IVN8 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
SBSPONQ8IVN8 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
SBSPONQ8IVN8 AC060834.1-201ENST00000443027 2032 ntBASIC12.19□□□□□ -0.46
SBSPONQ8IVN8 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SBSPONQ8IVN8 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SBSPONQ8IVN8 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC12.19□□□□□ -0.46
SBSPONQ8IVN8 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC12.19□□□□□ -0.46
SBSPONQ8IVN8 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC12.19□□□□□ -0.46
SBSPONQ8IVN8 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC12.19□□□□□ -0.46
SBSPONQ8IVN8 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SBSPONQ8IVN8 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SBSPONQ8IVN8 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
SBSPONQ8IVN8 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SBSPONQ8IVN8 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SBSPONQ8IVN8 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SBSPONQ8IVN8 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC12.19□□□□□ -0.46
SBSPONQ8IVN8 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SBSPONQ8IVN8 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
SBSPONQ8IVN8 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
SBSPONQ8IVN8 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SBSPONQ8IVN8 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
SBSPONQ8IVN8 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC12.18□□□□□ -0.46
SBSPONQ8IVN8 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
SBSPONQ8IVN8 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
SBSPONQ8IVN8 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SBSPONQ8IVN8 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
SBSPONQ8IVN8 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SBSPONQ8IVN8 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
SBSPONQ8IVN8 AP3S2-216ENST00000617003 1561 ntBASIC12.18□□□□□ -0.46
SBSPONQ8IVN8 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC12.18□□□□□ -0.46
SBSPONQ8IVN8 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SBSPONQ8IVN8 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SBSPONQ8IVN8 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
SBSPONQ8IVN8 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SBSPONQ8IVN8 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SBSPONQ8IVN8 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SBSPONQ8IVN8 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
SBSPONQ8IVN8 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SBSPONQ8IVN8 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
SBSPONQ8IVN8 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SBSPONQ8IVN8 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
SBSPONQ8IVN8 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SBSPONQ8IVN8 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SBSPONQ8IVN8 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC12.18□□□□□ -0.46
SBSPONQ8IVN8 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SBSPONQ8IVN8 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC12.18□□□□□ -0.46
SBSPONQ8IVN8 SLC25A1P3-201ENST00000395415 828 ntBASIC12.18□□□□□ -0.46
SBSPONQ8IVN8 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC12.18□□□□□ -0.46
SBSPONQ8IVN8 CDK2AP2P3-201ENST00000422476 372 ntBASIC12.18□□□□□ -0.46
SBSPONQ8IVN8 TSSK5P-201ENST00000423978 907 ntBASIC12.18□□□□□ -0.46
SBSPONQ8IVN8 NME2P1-201ENST00000426182 414 ntBASIC12.18□□□□□ -0.46
SBSPONQ8IVN8 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC12.18□□□□□ -0.46
SBSPONQ8IVN8 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC12.18□□□□□ -0.46
SBSPONQ8IVN8 RN7SL692P-201ENST00000464677 288 ntBASIC12.18□□□□□ -0.46
SBSPONQ8IVN8 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
SBSPONQ8IVN8 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
SBSPONQ8IVN8 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SBSPONQ8IVN8 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC12.18□□□□□ -0.46
SBSPONQ8IVN8 MPDU1-223ENST00000582151 728 ntBASIC12.18□□□□□ -0.46
SBSPONQ8IVN8 SPDYE22P-201ENST00000582158 798 ntBASIC12.18□□□□□ -0.46
SBSPONQ8IVN8 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SBSPONQ8IVN8 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SBSPONQ8IVN8 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC12.18□□□□□ -0.46
SBSPONQ8IVN8 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SBSPONQ8IVN8 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC12.18□□□□□ -0.46
SBSPONQ8IVN8 FOS-208ENST00000555686 1496 ntTSL 2 BASIC12.18□□□□□ -0.46
SBSPONQ8IVN8 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SBSPONQ8IVN8 GRAMD4P3-201ENST00000621665 1669 ntBASIC12.18□□□□□ -0.46
SBSPONQ8IVN8 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
SBSPONQ8IVN8 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC12.18□□□□□ -0.46
SBSPONQ8IVN8 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
SBSPONQ8IVN8 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
SBSPONQ8IVN8 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms