Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
PACS2Q86VP3 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC16.57■□□□□ 0.24
PACS2Q86VP3 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.57■□□□□ 0.24
PACS2Q86VP3 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
PACS2Q86VP3 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PACS2Q86VP3 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PACS2Q86VP3 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PACS2Q86VP3 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC16.56■□□□□ 0.24
PACS2Q86VP3 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
PACS2Q86VP3 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
PACS2Q86VP3 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PACS2Q86VP3 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PACS2Q86VP3 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC16.56■□□□□ 0.24
PACS2Q86VP3 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PACS2Q86VP3 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PACS2Q86VP3 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.56■□□□□ 0.24
PACS2Q86VP3 CNTNAP3P2-201ENST00000617175 3861 ntBASIC16.56■□□□□ 0.24
PACS2Q86VP3 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PACS2Q86VP3 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PACS2Q86VP3 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PACS2Q86VP3 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PACS2Q86VP3 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
PACS2Q86VP3 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PACS2Q86VP3 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PACS2Q86VP3 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PACS2Q86VP3 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC16.56■□□□□ 0.24
PACS2Q86VP3 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
PACS2Q86VP3 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.56■□□□□ 0.24
PACS2Q86VP3 TSPY12P-201ENST00000421279 868 ntBASIC16.56■□□□□ 0.24
PACS2Q86VP3 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.56■□□□□ 0.24
PACS2Q86VP3 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.56■□□□□ 0.24
PACS2Q86VP3 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PACS2Q86VP3 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PACS2Q86VP3 AC124312.2-201ENST00000546615 427 ntTSL 3 BASIC16.56■□□□□ 0.24
PACS2Q86VP3 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.56■□□□□ 0.24
PACS2Q86VP3 AP002414.4-201ENST00000589764 1148 ntBASIC16.56■□□□□ 0.24
PACS2Q86VP3 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.56■□□□□ 0.24
PACS2Q86VP3 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.56■□□□□ 0.24
PACS2Q86VP3 AC092119.3-201ENST00000612618 583 ntBASIC16.56■□□□□ 0.24
PACS2Q86VP3 NPAP1P7-201ENST00000613027 823 ntBASIC16.56■□□□□ 0.24
PACS2Q86VP3 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.56■□□□□ 0.24
PACS2Q86VP3 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PACS2Q86VP3 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
PACS2Q86VP3 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.56■□□□□ 0.24
PACS2Q86VP3 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
PACS2Q86VP3 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.56■□□□□ 0.24
PACS2Q86VP3 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
PACS2Q86VP3 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
PACS2Q86VP3 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PACS2Q86VP3 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
PACS2Q86VP3 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PACS2Q86VP3 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
PACS2Q86VP3 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PACS2Q86VP3 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PACS2Q86VP3 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
PACS2Q86VP3 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.56■□□□□ 0.24
PACS2Q86VP3 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PACS2Q86VP3 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
PACS2Q86VP3 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PACS2Q86VP3 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PACS2Q86VP3 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
PACS2Q86VP3 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC16.55■□□□□ 0.24
PACS2Q86VP3 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PACS2Q86VP3 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.55■□□□□ 0.24
PACS2Q86VP3 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
PACS2Q86VP3 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PACS2Q86VP3 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PACS2Q86VP3 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.55■□□□□ 0.24
PACS2Q86VP3 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.55■□□□□ 0.24
PACS2Q86VP3 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PACS2Q86VP3 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PACS2Q86VP3 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PACS2Q86VP3 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PACS2Q86VP3 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PACS2Q86VP3 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PACS2Q86VP3 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PACS2Q86VP3 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PACS2Q86VP3 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PACS2Q86VP3 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PACS2Q86VP3 KRT18P56-201ENST00000507275 550 ntBASIC16.55■□□□□ 0.24
PACS2Q86VP3 AC124864.1-201ENST00000623408 392 ntBASIC16.55■□□□□ 0.24
PACS2Q86VP3 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PACS2Q86VP3 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PACS2Q86VP3 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PACS2Q86VP3 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PACS2Q86VP3 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC16.55■□□□□ 0.24
PACS2Q86VP3 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PACS2Q86VP3 DGCR9-201ENST00000609630 2415 ntBASIC16.55■□□□□ 0.24
PACS2Q86VP3 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PACS2Q86VP3 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PACS2Q86VP3 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PACS2Q86VP3 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.54■□□□□ 0.24
PACS2Q86VP3 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PACS2Q86VP3 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
PACS2Q86VP3 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PACS2Q86VP3 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PACS2Q86VP3 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PACS2Q86VP3 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PACS2Q86VP3 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.54■□□□□ 0.24
PACS2Q86VP3 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms