Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAI1Q7Z5J4 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC13.84□□□□□ -0.19
RAI1Q7Z5J4 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC13.84□□□□□ -0.19
RAI1Q7Z5J4 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
RAI1Q7Z5J4 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
RAI1Q7Z5J4 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC13.83□□□□□ -0.19
RAI1Q7Z5J4 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
RAI1Q7Z5J4 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
RAI1Q7Z5J4 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
RAI1Q7Z5J4 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAI1Q7Z5J4 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAI1Q7Z5J4 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RAI1Q7Z5J4 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RAI1Q7Z5J4 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC13.83□□□□□ -0.2
RAI1Q7Z5J4 WT1-209ENST00000530998 2421 ntTSL 2 BASIC13.83□□□□□ -0.2
RAI1Q7Z5J4 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC13.83□□□□□ -0.2
RAI1Q7Z5J4 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC13.83□□□□□ -0.2
RAI1Q7Z5J4 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
RAI1Q7Z5J4 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
RAI1Q7Z5J4 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAI1Q7Z5J4 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
RAI1Q7Z5J4 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC13.83□□□□□ -0.2
RAI1Q7Z5J4 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAI1Q7Z5J4 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
RAI1Q7Z5J4 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RAI1Q7Z5J4 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAI1Q7Z5J4 SPDYE17-201ENST00000412399 783 ntBASIC13.83□□□□□ -0.2
RAI1Q7Z5J4 TTTY23B-201ENST00000442790 549 ntBASIC13.83□□□□□ -0.2
RAI1Q7Z5J4 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC13.83□□□□□ -0.2
RAI1Q7Z5J4 EEF1DP4-201ENST00000446006 880 ntBASIC13.83□□□□□ -0.2
RAI1Q7Z5J4 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAI1Q7Z5J4 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAI1Q7Z5J4 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC13.83□□□□□ -0.2
RAI1Q7Z5J4 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC13.83□□□□□ -0.2
RAI1Q7Z5J4 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RAI1Q7Z5J4 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC13.83□□□□□ -0.2
RAI1Q7Z5J4 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAI1Q7Z5J4 RELA-227ENST00000615805 2236 ntTSL 5 BASIC13.83□□□□□ -0.2
RAI1Q7Z5J4 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
RAI1Q7Z5J4 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RAI1Q7Z5J4 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC13.83□□□□□ -0.2
RAI1Q7Z5J4 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
RAI1Q7Z5J4 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
RAI1Q7Z5J4 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RAI1Q7Z5J4 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RAI1Q7Z5J4 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAI1Q7Z5J4 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC13.83□□□□□ -0.2
RAI1Q7Z5J4 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RAI1Q7Z5J4 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC13.82□□□□□ -0.2
RAI1Q7Z5J4 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
RAI1Q7Z5J4 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAI1Q7Z5J4 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAI1Q7Z5J4 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAI1Q7Z5J4 AC112492.5-201ENST00000421897 457 ntBASIC13.82□□□□□ -0.2
RAI1Q7Z5J4 AC007389.4-201ENST00000454674 793 ntBASIC13.82□□□□□ -0.2
RAI1Q7Z5J4 CD81-207ENST00000481687 890 ntTSL 2 BASIC13.82□□□□□ -0.2
RAI1Q7Z5J4 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC13.82□□□□□ -0.2
RAI1Q7Z5J4 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC13.82□□□□□ -0.2
RAI1Q7Z5J4 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC13.82□□□□□ -0.2
RAI1Q7Z5J4 RRP7BP-205ENST00000566851 833 ntBASIC13.82□□□□□ -0.2
RAI1Q7Z5J4 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC13.82□□□□□ -0.2
RAI1Q7Z5J4 AL365330.1-201ENST00000607459 531 ntBASIC13.82□□□□□ -0.2
RAI1Q7Z5J4 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
RAI1Q7Z5J4 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC13.82□□□□□ -0.2
RAI1Q7Z5J4 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RAI1Q7Z5J4 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAI1Q7Z5J4 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC13.82□□□□□ -0.2
RAI1Q7Z5J4 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAI1Q7Z5J4 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAI1Q7Z5J4 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC13.82□□□□□ -0.2
RAI1Q7Z5J4 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAI1Q7Z5J4 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
RAI1Q7Z5J4 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAI1Q7Z5J4 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC13.82□□□□□ -0.2
RAI1Q7Z5J4 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAI1Q7Z5J4 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAI1Q7Z5J4 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
RAI1Q7Z5J4 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC13.82□□□□□ -0.2
RAI1Q7Z5J4 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
RAI1Q7Z5J4 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAI1Q7Z5J4 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RAI1Q7Z5J4 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
RAI1Q7Z5J4 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
RAI1Q7Z5J4 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAI1Q7Z5J4 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAI1Q7Z5J4 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC13.82□□□□□ -0.2
RAI1Q7Z5J4 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RAI1Q7Z5J4 AC245100.5-201ENST00000452108 331 ntBASIC13.82□□□□□ -0.2
RAI1Q7Z5J4 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RAI1Q7Z5J4 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
RAI1Q7Z5J4 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC13.82□□□□□ -0.2
RAI1Q7Z5J4 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RAI1Q7Z5J4 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC13.82□□□□□ -0.2
RAI1Q7Z5J4 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC13.82□□□□□ -0.2
RAI1Q7Z5J4 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.82□□□□□ -0.2
RAI1Q7Z5J4 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
RAI1Q7Z5J4 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAI1Q7Z5J4 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC13.82□□□□□ -0.2
RAI1Q7Z5J4 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAI1Q7Z5J4 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms