Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
UBE3BQ7Z3V4 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
UBE3BQ7Z3V4 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
UBE3BQ7Z3V4 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
UBE3BQ7Z3V4 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC20.29■□□□□ 0.84
UBE3BQ7Z3V4 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
UBE3BQ7Z3V4 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
UBE3BQ7Z3V4 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
UBE3BQ7Z3V4 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
UBE3BQ7Z3V4 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
UBE3BQ7Z3V4 RN7SL618P-201ENST00000477850 296 ntBASIC20.29■□□□□ 0.84
UBE3BQ7Z3V4 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
UBE3BQ7Z3V4 REEP4-207ENST00000523293 913 ntTSL 3 BASIC20.29■□□□□ 0.84
UBE3BQ7Z3V4 PAM16-215ENST00000577031 548 ntTSL 4 BASIC20.29■□□□□ 0.84
UBE3BQ7Z3V4 SSH2-210ENST00000582084 560 ntTSL 3 BASIC20.29■□□□□ 0.84
UBE3BQ7Z3V4 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC20.29■□□□□ 0.84
UBE3BQ7Z3V4 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC20.29■□□□□ 0.84
UBE3BQ7Z3V4 AC009118.2-201ENST00000613275 655 ntBASIC20.29■□□□□ 0.84
UBE3BQ7Z3V4 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
UBE3BQ7Z3V4 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC20.29■□□□□ 0.84
UBE3BQ7Z3V4 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC20.29■□□□□ 0.84
UBE3BQ7Z3V4 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC20.29■□□□□ 0.84
UBE3BQ7Z3V4 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
UBE3BQ7Z3V4 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
UBE3BQ7Z3V4 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
UBE3BQ7Z3V4 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
UBE3BQ7Z3V4 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
UBE3BQ7Z3V4 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
UBE3BQ7Z3V4 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC20.29■□□□□ 0.84
UBE3BQ7Z3V4 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
UBE3BQ7Z3V4 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
UBE3BQ7Z3V4 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
UBE3BQ7Z3V4 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC20.28■□□□□ 0.84
UBE3BQ7Z3V4 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC20.28■□□□□ 0.84
UBE3BQ7Z3V4 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
UBE3BQ7Z3V4 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
UBE3BQ7Z3V4 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
UBE3BQ7Z3V4 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
UBE3BQ7Z3V4 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
UBE3BQ7Z3V4 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC20.28■□□□□ 0.84
UBE3BQ7Z3V4 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
UBE3BQ7Z3V4 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC20.28■□□□□ 0.84
UBE3BQ7Z3V4 SPTLC1P1-201ENST00000447199 261 ntBASIC20.28■□□□□ 0.84
UBE3BQ7Z3V4 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC20.28■□□□□ 0.84
UBE3BQ7Z3V4 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC20.28■□□□□ 0.84
UBE3BQ7Z3V4 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
UBE3BQ7Z3V4 PRR29-204ENST00000577953 565 ntTSL 4 BASIC20.28■□□□□ 0.84
UBE3BQ7Z3V4 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC20.28■□□□□ 0.84
UBE3BQ7Z3V4 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
UBE3BQ7Z3V4 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
UBE3BQ7Z3V4 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
UBE3BQ7Z3V4 PKD1P1-201ENST00000458669 6805 ntBASIC20.28■□□□□ 0.84
UBE3BQ7Z3V4 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
UBE3BQ7Z3V4 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
UBE3BQ7Z3V4 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
UBE3BQ7Z3V4 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC20.28■□□□□ 0.84
UBE3BQ7Z3V4 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
UBE3BQ7Z3V4 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
UBE3BQ7Z3V4 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC20.27■□□□□ 0.84
UBE3BQ7Z3V4 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC20.27■□□□□ 0.84
UBE3BQ7Z3V4 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
UBE3BQ7Z3V4 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
UBE3BQ7Z3V4 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
UBE3BQ7Z3V4 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC20.27■□□□□ 0.84
UBE3BQ7Z3V4 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
UBE3BQ7Z3V4 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
UBE3BQ7Z3V4 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
UBE3BQ7Z3V4 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
UBE3BQ7Z3V4 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
UBE3BQ7Z3V4 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
UBE3BQ7Z3V4 PNKD-204ENST00000436005 978 ntTSL 5 BASIC20.27■□□□□ 0.84
UBE3BQ7Z3V4 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC20.27■□□□□ 0.84
UBE3BQ7Z3V4 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
UBE3BQ7Z3V4 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC20.27■□□□□ 0.84
UBE3BQ7Z3V4 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC20.27■□□□□ 0.84
UBE3BQ7Z3V4 AC190387.1-201ENST00000551683 408 ntBASIC20.27■□□□□ 0.84
UBE3BQ7Z3V4 AC044860.1-202ENST00000559481 777 ntBASIC20.27■□□□□ 0.84
UBE3BQ7Z3V4 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC20.27■□□□□ 0.84
UBE3BQ7Z3V4 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC20.27■□□□□ 0.84
UBE3BQ7Z3V4 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC20.27■□□□□ 0.84
UBE3BQ7Z3V4 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC20.27■□□□□ 0.84
UBE3BQ7Z3V4 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
UBE3BQ7Z3V4 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
UBE3BQ7Z3V4 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
UBE3BQ7Z3V4 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
UBE3BQ7Z3V4 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
UBE3BQ7Z3V4 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC20.26■□□□□ 0.83
UBE3BQ7Z3V4 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC20.26■□□□□ 0.83
UBE3BQ7Z3V4 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
UBE3BQ7Z3V4 OS9-205ENST00000413095 1660 ntTSL 2 BASIC20.26■□□□□ 0.83
UBE3BQ7Z3V4 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
UBE3BQ7Z3V4 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC20.26■□□□□ 0.83
UBE3BQ7Z3V4 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
UBE3BQ7Z3V4 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC20.26■□□□□ 0.83
UBE3BQ7Z3V4 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
UBE3BQ7Z3V4 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
UBE3BQ7Z3V4 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
UBE3BQ7Z3V4 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC20.26■□□□□ 0.83
UBE3BQ7Z3V4 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
UBE3BQ7Z3V4 COQ9-214ENST00000567933 882 ntTSL 3 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms