Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.11■□□□□ 0.01
ZNF550Q7Z398 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.11■□□□□ 0.01
ZNF550Q7Z398 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF550Q7Z398 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF550Q7Z398 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
ZNF550Q7Z398 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.11■□□□□ 0.01
ZNF550Q7Z398 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.11■□□□□ 0.01
ZNF550Q7Z398 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.11■□□□□ 0.01
ZNF550Q7Z398 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.11■□□□□ 0.01
ZNF550Q7Z398 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.11■□□□□ 0.01
ZNF550Q7Z398 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.11■□□□□ 0.01
ZNF550Q7Z398 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.11■□□□□ 0.01
ZNF550Q7Z398 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF550Q7Z398 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.11■□□□□ 0.01
ZNF550Q7Z398 AC109635.5-201ENST00000533593 962 ntBASIC15.11■□□□□ 0.01
ZNF550Q7Z398 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.11■□□□□ 0.01
ZNF550Q7Z398 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.11■□□□□ 0.01
ZNF550Q7Z398 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.11■□□□□ 0.01
ZNF550Q7Z398 AL513190.1-201ENST00000621254 727 ntBASIC15.11■□□□□ 0.01
ZNF550Q7Z398 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF550Q7Z398 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.11■□□□□ 0.01
ZNF550Q7Z398 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.11■□□□□ 0.01
ZNF550Q7Z398 REXO1L8P-201ENST00000604378 1897 ntBASIC15.11■□□□□ 0.01
ZNF550Q7Z398 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
ZNF550Q7Z398 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF550Q7Z398 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF550Q7Z398 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.11■□□□□ 0.01
ZNF550Q7Z398 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.11■□□□□ 0.01
ZNF550Q7Z398 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.11■□□□□ 0.01
ZNF550Q7Z398 AC005622.1-201ENST00000636801 1703 ntBASIC15.11■□□□□ 0.01
ZNF550Q7Z398 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF550Q7Z398 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
ZNF550Q7Z398 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF550Q7Z398 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
ZNF550Q7Z398 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
ZNF550Q7Z398 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.1■□□□□ 0.01
ZNF550Q7Z398 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
ZNF550Q7Z398 U82695.1-201ENST00000635752 1889 ntBASIC15.1■□□□□ 0.01
ZNF550Q7Z398 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.1■□□□□ 0.01
ZNF550Q7Z398 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF550Q7Z398 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF550Q7Z398 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
ZNF550Q7Z398 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
ZNF550Q7Z398 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF550Q7Z398 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.1■□□□□ 0.01
ZNF550Q7Z398 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF550Q7Z398 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF550Q7Z398 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF550Q7Z398 AC004967.1-201ENST00000453589 447 ntBASIC15.1■□□□□ 0.01
ZNF550Q7Z398 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.1■□□□□ 0.01
ZNF550Q7Z398 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF550Q7Z398 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF550Q7Z398 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.1■□□□□ 0.01
ZNF550Q7Z398 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.1■□□□□ 0.01
ZNF550Q7Z398 AC134684.3-201ENST00000641758 218 ntBASIC15.1■□□□□ 0.01
ZNF550Q7Z398 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF550Q7Z398 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF550Q7Z398 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF550Q7Z398 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
ZNF550Q7Z398 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF550Q7Z398 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF550Q7Z398 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF550Q7Z398 AC022188.1-201ENST00000620960 1664 ntBASIC15.09■□□□□ 0.01
ZNF550Q7Z398 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.09■□□□□ 0.01
ZNF550Q7Z398 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF550Q7Z398 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.09■□□□□ 0.01
ZNF550Q7Z398 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.09■□□□□ 0.01
ZNF550Q7Z398 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF550Q7Z398 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF550Q7Z398 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF550Q7Z398 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF550Q7Z398 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF550Q7Z398 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF550Q7Z398 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF550Q7Z398 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.09■□□□□ 0.01
ZNF550Q7Z398 ALG1L5P-201ENST00000482043 771 ntBASIC15.09■□□□□ 0.01
ZNF550Q7Z398 KRT18P34-201ENST00000488218 1270 ntBASIC15.09■□□□□ 0.01
ZNF550Q7Z398 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
ZNF550Q7Z398 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.09■□□□□ 0.01
ZNF550Q7Z398 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF550Q7Z398 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.09■□□□□ 0.01
ZNF550Q7Z398 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.09■□□□□ 0.01
ZNF550Q7Z398 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.09■□□□□ 0.01
ZNF550Q7Z398 AL009183.1-201ENST00000603760 355 ntBASIC15.09■□□□□ 0.01
ZNF550Q7Z398 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF550Q7Z398 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.09■□□□□ 0.01
ZNF550Q7Z398 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.09■□□□□ 0.01
ZNF550Q7Z398 PCDHA1-201ENST00000378133 2726 ntBASIC15.09■□□□□ 0.01
ZNF550Q7Z398 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
ZNF550Q7Z398 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
ZNF550Q7Z398 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
ZNF550Q7Z398 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
ZNF550Q7Z398 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.09■□□□□ 0.01
ZNF550Q7Z398 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF550Q7Z398 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF550Q7Z398 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF550Q7Z398 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF550Q7Z398 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF550Q7Z398 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF550Q7Z398 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms