Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SCXQ7RTU7 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SCXQ7RTU7 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SCXQ7RTU7 AC046185.3-201ENST00000623228 1824 ntBASIC10.93□□□□□ -0.66
SCXQ7RTU7 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC10.93□□□□□ -0.66
SCXQ7RTU7 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SCXQ7RTU7 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC10.93□□□□□ -0.66
SCXQ7RTU7 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SCXQ7RTU7 AGGF1P2-201ENST00000426656 2106 ntBASIC10.93□□□□□ -0.66
SCXQ7RTU7 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
SCXQ7RTU7 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SCXQ7RTU7 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC10.93□□□□□ -0.66
SCXQ7RTU7 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SCXQ7RTU7 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SCXQ7RTU7 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SCXQ7RTU7 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SCXQ7RTU7 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SCXQ7RTU7 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
SCXQ7RTU7 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SCXQ7RTU7 CD82-202ENST00000342935 967 ntTSL 5 BASIC10.93□□□□□ -0.66
SCXQ7RTU7 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SCXQ7RTU7 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC10.93□□□□□ -0.66
SCXQ7RTU7 ACTG1P4-201ENST00000425123 1122 ntBASIC10.93□□□□□ -0.66
SCXQ7RTU7 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC10.93□□□□□ -0.66
SCXQ7RTU7 HTR5BP-201ENST00000430851 1154 ntBASIC10.93□□□□□ -0.66
SCXQ7RTU7 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC10.93□□□□□ -0.66
SCXQ7RTU7 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SCXQ7RTU7 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SCXQ7RTU7 YBX1P5-201ENST00000509441 847 ntBASIC10.93□□□□□ -0.66
SCXQ7RTU7 SMN2-210ENST00000511812 867 ntTSL 2 BASIC10.93□□□□□ -0.66
SCXQ7RTU7 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC10.93□□□□□ -0.66
SCXQ7RTU7 POLD4-207ENST00000531239 584 ntTSL 2 BASIC10.93□□□□□ -0.66
SCXQ7RTU7 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SCXQ7RTU7 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC10.93□□□□□ -0.66
SCXQ7RTU7 AC096734.2-201ENST00000562054 433 ntBASIC10.93□□□□□ -0.66
SCXQ7RTU7 PDPK2P-202ENST00000562415 1191 ntBASIC10.93□□□□□ -0.66
SCXQ7RTU7 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC10.93□□□□□ -0.66
SCXQ7RTU7 AC027796.2-201ENST00000575326 344 ntBASIC10.93□□□□□ -0.66
SCXQ7RTU7 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC10.93□□□□□ -0.66
SCXQ7RTU7 AC004877.2-201ENST00000623941 599 ntBASIC10.93□□□□□ -0.66
SCXQ7RTU7 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
SCXQ7RTU7 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
SCXQ7RTU7 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
SCXQ7RTU7 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC10.93□□□□□ -0.66
SCXQ7RTU7 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SCXQ7RTU7 AC006116.8-202ENST00000587620 1550 ntBASIC10.93□□□□□ -0.66
SCXQ7RTU7 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SCXQ7RTU7 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SCXQ7RTU7 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC10.93□□□□□ -0.66
SCXQ7RTU7 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SCXQ7RTU7 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SCXQ7RTU7 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SCXQ7RTU7 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
SCXQ7RTU7 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC10.93□□□□□ -0.66
SCXQ7RTU7 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SCXQ7RTU7 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SCXQ7RTU7 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC10.93□□□□□ -0.66
SCXQ7RTU7 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SCXQ7RTU7 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SCXQ7RTU7 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SCXQ7RTU7 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SCXQ7RTU7 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
SCXQ7RTU7 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SCXQ7RTU7 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC10.92□□□□□ -0.66
SCXQ7RTU7 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC10.92□□□□□ -0.66
SCXQ7RTU7 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SCXQ7RTU7 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
SCXQ7RTU7 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
SCXQ7RTU7 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SCXQ7RTU7 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
SCXQ7RTU7 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
SCXQ7RTU7 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
SCXQ7RTU7 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC10.92□□□□□ -0.66
SCXQ7RTU7 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
SCXQ7RTU7 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SCXQ7RTU7 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
SCXQ7RTU7 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
SCXQ7RTU7 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SCXQ7RTU7 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
SCXQ7RTU7 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SCXQ7RTU7 LBH-203ENST00000404397 543 ntTSL 4 BASIC10.92□□□□□ -0.66
SCXQ7RTU7 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC10.92□□□□□ -0.66
SCXQ7RTU7 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC10.92□□□□□ -0.66
SCXQ7RTU7 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC10.92□□□□□ -0.66
SCXQ7RTU7 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC10.92□□□□□ -0.66
SCXQ7RTU7 METTL21AP1-201ENST00000438852 635 ntBASIC10.92□□□□□ -0.66
SCXQ7RTU7 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC10.92□□□□□ -0.66
SCXQ7RTU7 KRT19P2-202ENST00000557173 1012 ntBASIC10.92□□□□□ -0.66
SCXQ7RTU7 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC10.92□□□□□ -0.66
SCXQ7RTU7 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
SCXQ7RTU7 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC10.92□□□□□ -0.66
SCXQ7RTU7 OR7E47P-204ENST00000575924 449 ntBASIC10.92□□□□□ -0.66
SCXQ7RTU7 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
SCXQ7RTU7 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC10.92□□□□□ -0.66
SCXQ7RTU7 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SCXQ7RTU7 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC10.92□□□□□ -0.66
SCXQ7RTU7 AMT-250ENST00000637682 1823 ntTSL 5 BASIC10.92□□□□□ -0.66
SCXQ7RTU7 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
SCXQ7RTU7 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SCXQ7RTU7 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms