Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
OTOP1Q7RTM1 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
OTOP1Q7RTM1 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
OTOP1Q7RTM1 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
OTOP1Q7RTM1 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
OTOP1Q7RTM1 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
OTOP1Q7RTM1 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
OTOP1Q7RTM1 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
OTOP1Q7RTM1 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
OTOP1Q7RTM1 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
OTOP1Q7RTM1 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC18.81■□□□□ 0.6
OTOP1Q7RTM1 AC093525.8-201ENST00000624099 1342 ntBASIC18.81■□□□□ 0.6
OTOP1Q7RTM1 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
OTOP1Q7RTM1 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.81■□□□□ 0.6
OTOP1Q7RTM1 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
OTOP1Q7RTM1 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
OTOP1Q7RTM1 AL603756.1-201ENST00000606511 2163 ntBASIC18.81■□□□□ 0.6
OTOP1Q7RTM1 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC18.81■□□□□ 0.6
OTOP1Q7RTM1 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
OTOP1Q7RTM1 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC18.81■□□□□ 0.6
OTOP1Q7RTM1 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
OTOP1Q7RTM1 GOLGA2P9-201ENST00000596977 1937 ntBASIC18.81■□□□□ 0.6
OTOP1Q7RTM1 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
OTOP1Q7RTM1 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
OTOP1Q7RTM1 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
OTOP1Q7RTM1 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC18.81■□□□□ 0.6
OTOP1Q7RTM1 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
OTOP1Q7RTM1 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
OTOP1Q7RTM1 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
OTOP1Q7RTM1 SERBP1P3-201ENST00000459980 809 ntBASIC18.81■□□□□ 0.6
OTOP1Q7RTM1 FADS2-205ENST00000517839 469 ntTSL 3 BASIC18.81■□□□□ 0.6
OTOP1Q7RTM1 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
OTOP1Q7RTM1 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
OTOP1Q7RTM1 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC18.81■□□□□ 0.6
OTOP1Q7RTM1 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
OTOP1Q7RTM1 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
OTOP1Q7RTM1 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
OTOP1Q7RTM1 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
OTOP1Q7RTM1 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC18.81■□□□□ 0.6
OTOP1Q7RTM1 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
OTOP1Q7RTM1 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
OTOP1Q7RTM1 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
OTOP1Q7RTM1 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
OTOP1Q7RTM1 AC106886.4-201ENST00000623557 2502 ntBASIC18.8■□□□□ 0.6
OTOP1Q7RTM1 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
OTOP1Q7RTM1 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
OTOP1Q7RTM1 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.8■□□□□ 0.6
OTOP1Q7RTM1 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
OTOP1Q7RTM1 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
OTOP1Q7RTM1 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
OTOP1Q7RTM1 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC18.8■□□□□ 0.6
OTOP1Q7RTM1 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
OTOP1Q7RTM1 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
OTOP1Q7RTM1 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
OTOP1Q7RTM1 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
OTOP1Q7RTM1 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
OTOP1Q7RTM1 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
OTOP1Q7RTM1 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
OTOP1Q7RTM1 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
OTOP1Q7RTM1 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
OTOP1Q7RTM1 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC18.8■□□□□ 0.6
OTOP1Q7RTM1 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC18.8■□□□□ 0.6
OTOP1Q7RTM1 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
OTOP1Q7RTM1 GOLGA2P4-201ENST00000441462 777 ntBASIC18.8■□□□□ 0.6
OTOP1Q7RTM1 CTBP2P5-201ENST00000454986 1264 ntBASIC18.8■□□□□ 0.6
OTOP1Q7RTM1 USP32P1-208ENST00000506594 1164 ntBASIC18.8■□□□□ 0.6
OTOP1Q7RTM1 SDHAP3-202ENST00000515467 728 ntBASIC18.8■□□□□ 0.6
OTOP1Q7RTM1 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC18.8■□□□□ 0.6
OTOP1Q7RTM1 ARL16-210ENST00000574938 751 ntTSL 2 BASIC18.8■□□□□ 0.6
OTOP1Q7RTM1 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC18.8■□□□□ 0.6
OTOP1Q7RTM1 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
OTOP1Q7RTM1 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
OTOP1Q7RTM1 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
OTOP1Q7RTM1 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
OTOP1Q7RTM1 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC18.8■□□□□ 0.6
OTOP1Q7RTM1 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
OTOP1Q7RTM1 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
OTOP1Q7RTM1 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
OTOP1Q7RTM1 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
OTOP1Q7RTM1 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
OTOP1Q7RTM1 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
OTOP1Q7RTM1 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
OTOP1Q7RTM1 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.79■□□□□ 0.6
OTOP1Q7RTM1 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC18.79■□□□□ 0.6
OTOP1Q7RTM1 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
OTOP1Q7RTM1 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC18.79■□□□□ 0.6
OTOP1Q7RTM1 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
OTOP1Q7RTM1 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
OTOP1Q7RTM1 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
OTOP1Q7RTM1 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
OTOP1Q7RTM1 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC18.79■□□□□ 0.6
OTOP1Q7RTM1 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
OTOP1Q7RTM1 APOC3-202ENST00000375345 604 ntTSL 5 BASIC18.79■□□□□ 0.6
OTOP1Q7RTM1 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
OTOP1Q7RTM1 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC18.79■□□□□ 0.6
OTOP1Q7RTM1 WDR53-204ENST00000433160 887 ntTSL 5 BASIC18.79■□□□□ 0.6
OTOP1Q7RTM1 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC18.79■□□□□ 0.6
OTOP1Q7RTM1 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC18.79■□□□□ 0.6
OTOP1Q7RTM1 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
OTOP1Q7RTM1 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms