Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
LCA10Q71F78 PENK-204ENST00000518770 863 ntTSL 2 BASIC8.9□□□□□ -0.98
LCA10Q71F78 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC8.9□□□□□ -0.98
LCA10Q71F78 AC104390.1-201ENST00000555663 520 ntBASIC8.9□□□□□ -0.98
LCA10Q71F78 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC8.9□□□□□ -0.98
LCA10Q71F78 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC8.9□□□□□ -0.98
LCA10Q71F78 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC8.9□□□□□ -0.98
LCA10Q71F78 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC8.9□□□□□ -0.98
LCA10Q71F78 AP005242.2-201ENST00000580065 1175 ntBASIC8.9□□□□□ -0.98
LCA10Q71F78 AC113410.3-201ENST00000623366 203 ntBASIC8.9□□□□□ -0.98
LCA10Q71F78 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC8.9□□□□□ -0.98
LCA10Q71F78 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC8.9□□□□□ -0.98
LCA10Q71F78 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC8.9□□□□□ -0.98
LCA10Q71F78 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
LCA10Q71F78 TBX3-201ENST00000257566 4208 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
LCA10Q71F78 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.98
LCA10Q71F78 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
LCA10Q71F78 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC8.9□□□□□ -0.98
LCA10Q71F78 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
LCA10Q71F78 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.98
LCA10Q71F78 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.98
LCA10Q71F78 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC8.9□□□□□ -0.98
LCA10Q71F78 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
LCA10Q71F78 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
LCA10Q71F78 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.99
LCA10Q71F78 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.99
LCA10Q71F78 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC8.9□□□□□ -0.99
LCA10Q71F78 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC8.9□□□□□ -0.99
LCA10Q71F78 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
LCA10Q71F78 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC8.9□□□□□ -0.99
LCA10Q71F78 MECOM-206ENST00000464456 5732 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.99
LCA10Q71F78 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.99
LCA10Q71F78 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
LCA10Q71F78 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
LCA10Q71F78 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
LCA10Q71F78 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.99
LCA10Q71F78 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.99
LCA10Q71F78 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.99
LCA10Q71F78 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC8.9□□□□□ -0.99
LCA10Q71F78 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
LCA10Q71F78 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC8.9□□□□□ -0.99
LCA10Q71F78 RNF216P1-203ENST00000404404 2427 ntBASIC8.9□□□□□ -0.99
LCA10Q71F78 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC8.9□□□□□ -0.99
LCA10Q71F78 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC8.9□□□□□ -0.99
LCA10Q71F78 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
LCA10Q71F78 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.99
LCA10Q71F78 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC8.9□□□□□ -0.99
LCA10Q71F78 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC8.89□□□□□ -0.99
LCA10Q71F78 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
LCA10Q71F78 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC8.89□□□□□ -0.99
LCA10Q71F78 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
LCA10Q71F78 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC8.89□□□□□ -0.99
LCA10Q71F78 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC8.89□□□□□ -0.99
LCA10Q71F78 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
LCA10Q71F78 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
LCA10Q71F78 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC8.89□□□□□ -0.99
LCA10Q71F78 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
LCA10Q71F78 UMODL1-205ENST00000408910 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
LCA10Q71F78 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
LCA10Q71F78 ATL2-204ENST00000406122 2864 ntTSL 5 BASIC8.89□□□□□ -0.99
LCA10Q71F78 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
LCA10Q71F78 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
LCA10Q71F78 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
LCA10Q71F78 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
LCA10Q71F78 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC8.89□□□□□ -0.99
LCA10Q71F78 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
LCA10Q71F78 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
LCA10Q71F78 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
LCA10Q71F78 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
LCA10Q71F78 AC133963.1-201ENST00000504166 1679 ntBASIC8.89□□□□□ -0.99
LCA10Q71F78 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
LCA10Q71F78 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC8.89□□□□□ -0.99
LCA10Q71F78 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
LCA10Q71F78 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
LCA10Q71F78 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
LCA10Q71F78 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
LCA10Q71F78 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
LCA10Q71F78 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC8.89□□□□□ -0.99
LCA10Q71F78 CCR12P-201ENST00000446203 998 ntBASIC8.89□□□□□ -0.99
LCA10Q71F78 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
LCA10Q71F78 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC8.89□□□□□ -0.99
LCA10Q71F78 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
LCA10Q71F78 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC8.89□□□□□ -0.99
LCA10Q71F78 AC142381.4-202ENST00000563973 229 ntBASIC8.89□□□□□ -0.99
LCA10Q71F78 AL353719.1-201ENST00000566847 864 ntBASIC8.89□□□□□ -0.99
LCA10Q71F78 WWOX-216ENST00000569818 525 ntBASIC8.89□□□□□ -0.99
LCA10Q71F78 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC8.89□□□□□ -0.99
LCA10Q71F78 MIR3180-4-201ENST00000582223 153 ntBASIC8.89□□□□□ -0.99
LCA10Q71F78 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC8.89□□□□□ -0.99
LCA10Q71F78 AC026471.5-201ENST00000615068 467 ntBASIC8.89□□□□□ -0.99
LCA10Q71F78 ITM2C-210ENST00000620962 501 ntBASIC8.89□□□□□ -0.99
LCA10Q71F78 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
LCA10Q71F78 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC8.89□□□□□ -0.99
LCA10Q71F78 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
LCA10Q71F78 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
LCA10Q71F78 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC8.89□□□□□ -0.99
LCA10Q71F78 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
LCA10Q71F78 AC015909.5-201ENST00000624336 2266 ntBASIC8.89□□□□□ -0.99
LCA10Q71F78 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC8.89□□□□□ -0.99
LCA10Q71F78 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms