Protein–RNA interactions for Protein: Q6P435

Putative uncharacterized SMG1-like protein, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q6P435 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC13.69□□□□□ -0.22
Q6P435 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Q6P435 AL589702.1-201ENST00000641229 1509 ntBASIC13.69□□□□□ -0.22
Q6P435 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC13.69□□□□□ -0.22
Q6P435 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Q6P435 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Q6P435 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Q6P435 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC13.69□□□□□ -0.22
Q6P435 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Q6P435 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Q6P435 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Q6P435 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC13.69□□□□□ -0.22
Q6P435 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC13.68□□□□□ -0.22
Q6P435 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Q6P435 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Q6P435 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Q6P435 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Q6P435 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC13.68□□□□□ -0.22
Q6P435 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Q6P435 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Q6P435 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Q6P435 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Q6P435 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Q6P435 HLA-DQB2-231ENST00000435145 2026 ntBASIC13.68□□□□□ -0.22
Q6P435 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC13.68□□□□□ -0.22
Q6P435 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Q6P435 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC13.68□□□□□ -0.22
Q6P435 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Q6P435 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Q6P435 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
Q6P435 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Q6P435 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC13.68□□□□□ -0.22
Q6P435 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Q6P435 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Q6P435 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Q6P435 AC002056.1-201ENST00000395613 760 ntBASIC13.68□□□□□ -0.22
Q6P435 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC13.68□□□□□ -0.22
Q6P435 AL591424.1-201ENST00000442569 1213 ntBASIC13.68□□□□□ -0.22
Q6P435 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC13.68□□□□□ -0.22
Q6P435 RNA5SP416-201ENST00000516838 111 ntBASIC13.68□□□□□ -0.22
Q6P435 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC13.68□□□□□ -0.22
Q6P435 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC13.68□□□□□ -0.22
Q6P435 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC13.68□□□□□ -0.22
Q6P435 AC099522.2-201ENST00000607001 744 ntBASIC13.68□□□□□ -0.22
Q6P435 AL365330.1-201ENST00000607459 531 ntBASIC13.68□□□□□ -0.22
Q6P435 AC120114.3-201ENST00000611923 658 ntBASIC13.68□□□□□ -0.22
Q6P435 NME4-212ENST00000621774 904 ntTSL 3 BASIC13.68□□□□□ -0.22
Q6P435 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Q6P435 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Q6P435 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Q6P435 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC13.68□□□□□ -0.22
Q6P435 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Q6P435 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC13.68□□□□□ -0.22
Q6P435 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Q6P435 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Q6P435 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
Q6P435 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Q6P435 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Q6P435 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Q6P435 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Q6P435 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Q6P435 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Q6P435 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Q6P435 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC13.67□□□□□ -0.22
Q6P435 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC13.67□□□□□ -0.22
Q6P435 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Q6P435 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Q6P435 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Q6P435 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Q6P435 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Q6P435 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Q6P435 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Q6P435 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Q6P435 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Q6P435 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC13.67□□□□□ -0.22
Q6P435 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC13.67□□□□□ -0.22
Q6P435 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Q6P435 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Q6P435 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Q6P435 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Q6P435 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Q6P435 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Q6P435 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Q6P435 HAUS4P1-201ENST00000406739 1145 ntBASIC13.67□□□□□ -0.22
Q6P435 KRT18P3-201ENST00000451602 1288 ntBASIC13.67□□□□□ -0.22
Q6P435 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC13.67□□□□□ -0.22
Q6P435 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Q6P435 PRYP6-201ENST00000514804 343 ntBASIC13.67□□□□□ -0.22
Q6P435 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC13.67□□□□□ -0.22
Q6P435 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC13.67□□□□□ -0.22
Q6P435 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC13.67□□□□□ -0.22
Q6P435 FAM197Y3-203ENST00000618346 717 ntBASIC13.67□□□□□ -0.22
Q6P435 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Q6P435 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC13.67□□□□□ -0.22
Q6P435 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Q6P435 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Q6P435 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Q6P435 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Q6P435 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Q6P435 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms