Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.29□□□□□ -0.12
ATPAF1Q5TC12 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATPAF1Q5TC12 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
ATPAF1Q5TC12 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATPAF1Q5TC12 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATPAF1Q5TC12 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATPAF1Q5TC12 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATPAF1Q5TC12 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
ATPAF1Q5TC12 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ATPAF1Q5TC12 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
ATPAF1Q5TC12 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.28□□□□□ -0.12
ATPAF1Q5TC12 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ATPAF1Q5TC12 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ATPAF1Q5TC12 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ATPAF1Q5TC12 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ATPAF1Q5TC12 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ATPAF1Q5TC12 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ATPAF1Q5TC12 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
ATPAF1Q5TC12 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ATPAF1Q5TC12 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ATPAF1Q5TC12 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ATPAF1Q5TC12 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ATPAF1Q5TC12 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ATPAF1Q5TC12 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC14.28□□□□□ -0.12
ATPAF1Q5TC12 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ATPAF1Q5TC12 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
ATPAF1Q5TC12 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
ATPAF1Q5TC12 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.28□□□□□ -0.12
ATPAF1Q5TC12 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
ATPAF1Q5TC12 IGHV3-65-201ENST00000523210 341 ntBASIC14.28□□□□□ -0.12
ATPAF1Q5TC12 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC14.28□□□□□ -0.12
ATPAF1Q5TC12 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC14.28□□□□□ -0.12
ATPAF1Q5TC12 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC14.28□□□□□ -0.12
ATPAF1Q5TC12 AL603832.2-201ENST00000566195 2125 ntBASIC14.28□□□□□ -0.12
ATPAF1Q5TC12 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.28□□□□□ -0.12
ATPAF1Q5TC12 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC14.28□□□□□ -0.12
ATPAF1Q5TC12 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
ATPAF1Q5TC12 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ATPAF1Q5TC12 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ATPAF1Q5TC12 AL049840.3-201ENST00000602669 611 ntBASIC14.28□□□□□ -0.12
ATPAF1Q5TC12 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC14.28□□□□□ -0.12
ATPAF1Q5TC12 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
ATPAF1Q5TC12 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
ATPAF1Q5TC12 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ATPAF1Q5TC12 AC116407.3-201ENST00000623905 1129 ntBASIC14.28□□□□□ -0.12
ATPAF1Q5TC12 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
ATPAF1Q5TC12 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC14.28□□□□□ -0.12
ATPAF1Q5TC12 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC14.28□□□□□ -0.12
ATPAF1Q5TC12 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ATPAF1Q5TC12 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
ATPAF1Q5TC12 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ATPAF1Q5TC12 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ATPAF1Q5TC12 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ATPAF1Q5TC12 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ATPAF1Q5TC12 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.28□□□□□ -0.12
ATPAF1Q5TC12 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ATPAF1Q5TC12 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
ATPAF1Q5TC12 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ATPAF1Q5TC12 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
ATPAF1Q5TC12 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
ATPAF1Q5TC12 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ATPAF1Q5TC12 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ATPAF1Q5TC12 AL596087.1-201ENST00000400979 1969 ntBASIC14.27□□□□□ -0.12
ATPAF1Q5TC12 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
ATPAF1Q5TC12 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
ATPAF1Q5TC12 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ATPAF1Q5TC12 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
ATPAF1Q5TC12 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
ATPAF1Q5TC12 AP002414.3-201ENST00000589352 1468 ntBASIC14.27□□□□□ -0.12
ATPAF1Q5TC12 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.27□□□□□ -0.12
ATPAF1Q5TC12 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
ATPAF1Q5TC12 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
ATPAF1Q5TC12 AC243591.1-201ENST00000452967 1364 ntBASIC14.27□□□□□ -0.12
ATPAF1Q5TC12 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
ATPAF1Q5TC12 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.27□□□□□ -0.13
ATPAF1Q5TC12 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ATPAF1Q5TC12 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ATPAF1Q5TC12 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ATPAF1Q5TC12 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.27□□□□□ -0.13
ATPAF1Q5TC12 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ATPAF1Q5TC12 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC14.27□□□□□ -0.13
ATPAF1Q5TC12 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
ATPAF1Q5TC12 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC14.27□□□□□ -0.13
ATPAF1Q5TC12 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ATPAF1Q5TC12 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC14.27□□□□□ -0.13
ATPAF1Q5TC12 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ATPAF1Q5TC12 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
ATPAF1Q5TC12 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC14.27□□□□□ -0.13
ATPAF1Q5TC12 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC14.27□□□□□ -0.13
ATPAF1Q5TC12 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ATPAF1Q5TC12 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
ATPAF1Q5TC12 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
ATPAF1Q5TC12 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
ATPAF1Q5TC12 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
ATPAF1Q5TC12 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ATPAF1Q5TC12 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ATPAF1Q5TC12 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
ATPAF1Q5TC12 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ATPAF1Q5TC12 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
ATPAF1Q5TC12 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms