Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
TRIM71Q2Q1W2 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.7■□□□□ 0.42
TRIM71Q2Q1W2 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM71Q2Q1W2 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM71Q2Q1W2 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.7■□□□□ 0.42
TRIM71Q2Q1W2 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM71Q2Q1W2 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM71Q2Q1W2 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
TRIM71Q2Q1W2 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM71Q2Q1W2 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
TRIM71Q2Q1W2 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
TRIM71Q2Q1W2 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM71Q2Q1W2 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
TRIM71Q2Q1W2 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM71Q2Q1W2 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM71Q2Q1W2 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC17.69■□□□□ 0.42
TRIM71Q2Q1W2 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM71Q2Q1W2 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC17.69■□□□□ 0.42
TRIM71Q2Q1W2 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC17.69■□□□□ 0.42
TRIM71Q2Q1W2 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC17.69■□□□□ 0.42
TRIM71Q2Q1W2 TIMM17BP1-201ENST00000545713 516 ntBASIC17.69■□□□□ 0.42
TRIM71Q2Q1W2 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TRIM71Q2Q1W2 ORC6-206ENST00000568364 888 ntTSL 5 BASIC17.69■□□□□ 0.42
TRIM71Q2Q1W2 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM71Q2Q1W2 AC008735.3-201ENST00000596646 500 ntBASIC17.69■□□□□ 0.42
TRIM71Q2Q1W2 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC17.69■□□□□ 0.42
TRIM71Q2Q1W2 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM71Q2Q1W2 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM71Q2Q1W2 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.69■□□□□ 0.42
TRIM71Q2Q1W2 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.69■□□□□ 0.42
TRIM71Q2Q1W2 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM71Q2Q1W2 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM71Q2Q1W2 AC020763.4-201ENST00000623414 4170 ntBASIC17.69■□□□□ 0.42
TRIM71Q2Q1W2 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.69■□□□□ 0.42
TRIM71Q2Q1W2 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM71Q2Q1W2 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC17.69■□□□□ 0.42
TRIM71Q2Q1W2 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.69■□□□□ 0.42
TRIM71Q2Q1W2 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM71Q2Q1W2 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.68■□□□□ 0.42
TRIM71Q2Q1W2 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TRIM71Q2Q1W2 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM71Q2Q1W2 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM71Q2Q1W2 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM71Q2Q1W2 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TRIM71Q2Q1W2 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM71Q2Q1W2 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM71Q2Q1W2 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM71Q2Q1W2 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM71Q2Q1W2 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM71Q2Q1W2 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM71Q2Q1W2 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM71Q2Q1W2 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM71Q2Q1W2 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM71Q2Q1W2 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM71Q2Q1W2 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM71Q2Q1W2 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM71Q2Q1W2 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM71Q2Q1W2 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TRIM71Q2Q1W2 EEF1DP4-201ENST00000446006 880 ntBASIC17.68■□□□□ 0.42
TRIM71Q2Q1W2 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC17.68■□□□□ 0.42
TRIM71Q2Q1W2 FXR1-221ENST00000491674 365 ntTSL 2 BASIC17.68■□□□□ 0.42
TRIM71Q2Q1W2 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM71Q2Q1W2 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.68■□□□□ 0.42
TRIM71Q2Q1W2 AC092552.1-201ENST00000547243 906 ntBASIC17.68■□□□□ 0.42
TRIM71Q2Q1W2 SUOX-214ENST00000551841 906 ntTSL 3 BASIC17.68■□□□□ 0.42
TRIM71Q2Q1W2 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC17.68■□□□□ 0.42
TRIM71Q2Q1W2 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM71Q2Q1W2 AL033527.5-201ENST00000641382 801 ntBASIC17.68■□□□□ 0.42
TRIM71Q2Q1W2 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM71Q2Q1W2 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM71Q2Q1W2 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.68■□□□□ 0.42
TRIM71Q2Q1W2 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.68■□□□□ 0.42
TRIM71Q2Q1W2 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM71Q2Q1W2 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM71Q2Q1W2 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM71Q2Q1W2 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM71Q2Q1W2 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM71Q2Q1W2 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM71Q2Q1W2 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
TRIM71Q2Q1W2 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.67■□□□□ 0.42
TRIM71Q2Q1W2 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM71Q2Q1W2 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM71Q2Q1W2 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM71Q2Q1W2 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.67■□□□□ 0.42
TRIM71Q2Q1W2 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM71Q2Q1W2 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
TRIM71Q2Q1W2 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM71Q2Q1W2 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TRIM71Q2Q1W2 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TRIM71Q2Q1W2 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM71Q2Q1W2 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM71Q2Q1W2 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC17.67■□□□□ 0.42
TRIM71Q2Q1W2 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC17.67■□□□□ 0.42
TRIM71Q2Q1W2 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC17.67■□□□□ 0.42
TRIM71Q2Q1W2 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TRIM71Q2Q1W2 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
TRIM71Q2Q1W2 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM71Q2Q1W2 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC17.67■□□□□ 0.42
TRIM71Q2Q1W2 LINC01115-203ENST00000606068 577 ntBASIC17.67■□□□□ 0.42
TRIM71Q2Q1W2 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms