Protein–RNA interactions for Protein: Q06547

GABPB1, GA-binding protein subunit beta-1, humanhuman

Predicted RBP Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1Q06547 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
GABPB1Q06547 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC16.72■□□□□ 0.27
GABPB1Q06547 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
GABPB1Q06547 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.72■□□□□ 0.27
GABPB1Q06547 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
GABPB1Q06547 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.72■□□□□ 0.27
GABPB1Q06547 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GABPB1Q06547 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GABPB1Q06547 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GABPB1Q06547 AC096633.1-201ENST00000422446 749 ntBASIC16.72■□□□□ 0.27
GABPB1Q06547 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
GABPB1Q06547 UNC93B4-201ENST00000505679 747 ntBASIC16.72■□□□□ 0.27
GABPB1Q06547 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC16.72■□□□□ 0.27
GABPB1Q06547 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC16.72■□□□□ 0.27
GABPB1Q06547 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC16.72■□□□□ 0.27
GABPB1Q06547 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC16.72■□□□□ 0.27
GABPB1Q06547 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC16.72■□□□□ 0.27
GABPB1Q06547 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC16.72■□□□□ 0.27
GABPB1Q06547 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.72■□□□□ 0.27
GABPB1Q06547 AC087623.3-201ENST00000607047 1098 ntBASIC16.72■□□□□ 0.27
GABPB1Q06547 AC019129.2-201ENST00000609837 1235 ntBASIC16.72■□□□□ 0.27
GABPB1Q06547 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.72■□□□□ 0.27
GABPB1Q06547 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.72■□□□□ 0.27
GABPB1Q06547 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GABPB1Q06547 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
GABPB1Q06547 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
GABPB1Q06547 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
GABPB1Q06547 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC16.72■□□□□ 0.27
GABPB1Q06547 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
GABPB1Q06547 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
GABPB1Q06547 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
GABPB1Q06547 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
GABPB1Q06547 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC16.72■□□□□ 0.27
GABPB1Q06547 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC16.72■□□□□ 0.27
GABPB1Q06547 NUTM2HP-201ENST00000442076 2498 ntBASIC16.72■□□□□ 0.27
GABPB1Q06547 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.72■□□□□ 0.27
GABPB1Q06547 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GABPB1Q06547 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC16.72■□□□□ 0.27
GABPB1Q06547 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC16.72■□□□□ 0.27
GABPB1Q06547 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC16.72■□□□□ 0.27
GABPB1Q06547 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
GABPB1Q06547 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
GABPB1Q06547 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
GABPB1Q06547 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.71■□□□□ 0.27
GABPB1Q06547 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GABPB1Q06547 AL591122.2-201ENST00000624125 1853 ntBASIC16.71■□□□□ 0.27
GABPB1Q06547 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GABPB1Q06547 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
GABPB1Q06547 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
GABPB1Q06547 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
GABPB1Q06547 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GABPB1Q06547 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GABPB1Q06547 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GABPB1Q06547 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GABPB1Q06547 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GABPB1Q06547 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GABPB1Q06547 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
GABPB1Q06547 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC16.71■□□□□ 0.27
GABPB1Q06547 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
GABPB1Q06547 GXYLT1P2-201ENST00000433312 1230 ntBASIC16.71■□□□□ 0.27
GABPB1Q06547 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC16.71■□□□□ 0.27
GABPB1Q06547 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC16.71■□□□□ 0.27
GABPB1Q06547 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC16.71■□□□□ 0.27
GABPB1Q06547 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GABPB1Q06547 AC130371.2-201ENST00000619443 611 ntBASIC16.71■□□□□ 0.27
GABPB1Q06547 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GABPB1Q06547 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GABPB1Q06547 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GABPB1Q06547 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.71■□□□□ 0.27
GABPB1Q06547 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
GABPB1Q06547 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC16.71■□□□□ 0.27
GABPB1Q06547 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
GABPB1Q06547 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC16.71■□□□□ 0.26
GABPB1Q06547 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC16.71■□□□□ 0.26
GABPB1Q06547 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GABPB1Q06547 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
GABPB1Q06547 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC16.7■□□□□ 0.26
GABPB1Q06547 LINC01144-201ENST00000626198 1710 ntBASIC16.7■□□□□ 0.26
GABPB1Q06547 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC16.7■□□□□ 0.26
GABPB1Q06547 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC16.7■□□□□ 0.26
GABPB1Q06547 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
GABPB1Q06547 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GABPB1Q06547 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GABPB1Q06547 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GABPB1Q06547 KCP-203ENST00000610776 5108 ntTSL 5 BASIC16.7■□□□□ 0.26
GABPB1Q06547 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GABPB1Q06547 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GABPB1Q06547 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
GABPB1Q06547 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GABPB1Q06547 AC011474.4-201ENST00000623523 2076 ntBASIC16.7■□□□□ 0.26
GABPB1Q06547 AL135999.2-201ENST00000622438 1686 ntBASIC16.7■□□□□ 0.26
GABPB1Q06547 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GABPB1Q06547 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GABPB1Q06547 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.7■□□□□ 0.26
GABPB1Q06547 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.7■□□□□ 0.26
GABPB1Q06547 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC16.7■□□□□ 0.26
GABPB1Q06547 DUSP5P2-201ENST00000426873 1033 ntBASIC16.7■□□□□ 0.26
GABPB1Q06547 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC16.7■□□□□ 0.26
GABPB1Q06547 PARL-206ENST00000435888 1098 ntTSL 5 BASIC16.7■□□□□ 0.26
GABPB1Q06547 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms