Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC9.89□□□□□ -0.83
HSPG2P98160 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
HSPG2P98160 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
HSPG2P98160 HOMER2P2-201ENST00000451621 847 ntBASIC9.89□□□□□ -0.83
HSPG2P98160 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
HSPG2P98160 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC9.89□□□□□ -0.83
HSPG2P98160 TUBBP5-203ENST00000508529 1334 ntBASIC9.89□□□□□ -0.83
HSPG2P98160 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
HSPG2P98160 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
HSPG2P98160 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC9.89□□□□□ -0.83
HSPG2P98160 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC9.89□□□□□ -0.83
HSPG2P98160 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC9.89□□□□□ -0.83
HSPG2P98160 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC9.89□□□□□ -0.83
HSPG2P98160 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
HSPG2P98160 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
HSPG2P98160 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
HSPG2P98160 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC9.89□□□□□ -0.83
HSPG2P98160 SMS-201ENST00000379404 1174 ntTSL 3 BASIC9.89□□□□□ -0.83
HSPG2P98160 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
HSPG2P98160 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
HSPG2P98160 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC9.89□□□□□ -0.83
HSPG2P98160 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC9.89□□□□□ -0.83
HSPG2P98160 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
HSPG2P98160 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
HSPG2P98160 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
HSPG2P98160 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
HSPG2P98160 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
HSPG2P98160 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
HSPG2P98160 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC9.89□□□□□ -0.83
HSPG2P98160 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC9.89□□□□□ -0.83
HSPG2P98160 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC9.89□□□□□ -0.83
HSPG2P98160 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
HSPG2P98160 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
HSPG2P98160 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
HSPG2P98160 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC9.89□□□□□ -0.83
HSPG2P98160 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC9.89□□□□□ -0.83
HSPG2P98160 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
HSPG2P98160 RN7SL713P-201ENST00000582127 302 ntBASIC9.89□□□□□ -0.83
HSPG2P98160 AC145423.3-201ENST00000615987 467 ntBASIC9.89□□□□□ -0.83
HSPG2P98160 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
HSPG2P98160 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
HSPG2P98160 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC9.89□□□□□ -0.83
HSPG2P98160 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
HSPG2P98160 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
HSPG2P98160 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
HSPG2P98160 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC9.89□□□□□ -0.83
HSPG2P98160 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
HSPG2P98160 ELP6-209ENST00000446787 894 ntTSL 3 BASIC9.89□□□□□ -0.83
HSPG2P98160 HIST2H2BB-201ENST00000449108 381 ntBASIC9.89□□□□□ -0.83
HSPG2P98160 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC9.89□□□□□ -0.83
HSPG2P98160 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
HSPG2P98160 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC9.89□□□□□ -0.83
HSPG2P98160 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC9.89□□□□□ -0.83
HSPG2P98160 MIR4321-201ENST00000592276 80 ntBASIC9.89□□□□□ -0.83
HSPG2P98160 AL353726.2-201ENST00000623259 884 ntBASIC9.89□□□□□ -0.83
HSPG2P98160 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC9.88□□□□□ -0.83
HSPG2P98160 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
HSPG2P98160 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
HSPG2P98160 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
HSPG2P98160 AC009113.1-201ENST00000570267 2443 ntBASIC9.88□□□□□ -0.83
HSPG2P98160 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
HSPG2P98160 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
HSPG2P98160 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
HSPG2P98160 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
HSPG2P98160 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
HSPG2P98160 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
HSPG2P98160 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
HSPG2P98160 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
HSPG2P98160 AC093433.1-201ENST00000458048 571 ntBASIC9.88□□□□□ -0.83
HSPG2P98160 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
HSPG2P98160 CSH2-206ENST00000560142 749 ntTSL 5 BASIC9.88□□□□□ -0.83
HSPG2P98160 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
HSPG2P98160 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
HSPG2P98160 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC9.88□□□□□ -0.83
HSPG2P98160 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
HSPG2P98160 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC9.88□□□□□ -0.83
HSPG2P98160 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
HSPG2P98160 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC9.88□□□□□ -0.83
HSPG2P98160 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
HSPG2P98160 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
HSPG2P98160 TNXA-203ENST00000507684 2038 ntBASIC9.88□□□□□ -0.83
HSPG2P98160 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
HSPG2P98160 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
HSPG2P98160 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC9.88□□□□□ -0.83
HSPG2P98160 RERG-209ENST00000546331 1383 ntTSL 2 BASIC9.88□□□□□ -0.83
HSPG2P98160 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
HSPG2P98160 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC9.88□□□□□ -0.83
HSPG2P98160 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC9.88□□□□□ -0.83
HSPG2P98160 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
HSPG2P98160 PPOX-204ENST00000462866 473 ntTSL 5 BASIC9.88□□□□□ -0.83
HSPG2P98160 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC9.88□□□□□ -0.83
HSPG2P98160 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC9.88□□□□□ -0.83
HSPG2P98160 AC009486.1-201ENST00000569860 813 ntBASIC9.88□□□□□ -0.83
HSPG2P98160 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC9.88□□□□□ -0.83
HSPG2P98160 AC132192.2-201ENST00000596206 1147 ntBASIC9.88□□□□□ -0.83
HSPG2P98160 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC9.88□□□□□ -0.83
HSPG2P98160 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
HSPG2P98160 AC148477.9-201ENST00000623974 539 ntBASIC9.88□□□□□ -0.83
HSPG2P98160 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
HSPG2P98160 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC9.88□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms