Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SEC61A1P61619 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
SEC61A1P61619 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC14.42□□□□□ -0.1
SEC61A1P61619 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.42□□□□□ -0.1
SEC61A1P61619 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SEC61A1P61619 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SEC61A1P61619 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SEC61A1P61619 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
SEC61A1P61619 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.42□□□□□ -0.1
SEC61A1P61619 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
SEC61A1P61619 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SEC61A1P61619 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SEC61A1P61619 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
SEC61A1P61619 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SEC61A1P61619 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
SEC61A1P61619 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SEC61A1P61619 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SEC61A1P61619 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SEC61A1P61619 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SEC61A1P61619 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.42□□□□□ -0.1
SEC61A1P61619 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SEC61A1P61619 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SEC61A1P61619 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC14.42□□□□□ -0.1
SEC61A1P61619 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SEC61A1P61619 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
SEC61A1P61619 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC14.42□□□□□ -0.1
SEC61A1P61619 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC14.42□□□□□ -0.1
SEC61A1P61619 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC14.42□□□□□ -0.1
SEC61A1P61619 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC14.42□□□□□ -0.1
SEC61A1P61619 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SEC61A1P61619 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
SEC61A1P61619 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC14.42□□□□□ -0.1
SEC61A1P61619 AL139424.1-201ENST00000607572 797 ntBASIC14.42□□□□□ -0.1
SEC61A1P61619 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
SEC61A1P61619 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
SEC61A1P61619 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.42□□□□□ -0.1
SEC61A1P61619 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SEC61A1P61619 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC14.42□□□□□ -0.1
SEC61A1P61619 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SEC61A1P61619 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SEC61A1P61619 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.42□□□□□ -0.1
SEC61A1P61619 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
SEC61A1P61619 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.42□□□□□ -0.1
SEC61A1P61619 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.42□□□□□ -0.1
SEC61A1P61619 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.42□□□□□ -0.1
SEC61A1P61619 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SEC61A1P61619 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC14.42□□□□□ -0.1
SEC61A1P61619 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
SEC61A1P61619 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.41□□□□□ -0.1
SEC61A1P61619 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SEC61A1P61619 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
SEC61A1P61619 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.41□□□□□ -0.1
SEC61A1P61619 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
SEC61A1P61619 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SEC61A1P61619 FAM45BP-202ENST00000592932 1624 ntBASIC14.41□□□□□ -0.1
SEC61A1P61619 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.41□□□□□ -0.1
SEC61A1P61619 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.41□□□□□ -0.1
SEC61A1P61619 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SEC61A1P61619 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC14.41□□□□□ -0.1
SEC61A1P61619 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SEC61A1P61619 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SEC61A1P61619 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SEC61A1P61619 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SEC61A1P61619 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SEC61A1P61619 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SEC61A1P61619 ENSA-206ENST00000361631 725 ntTSL 2 BASIC14.41□□□□□ -0.1
SEC61A1P61619 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SEC61A1P61619 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC14.41□□□□□ -0.1
SEC61A1P61619 LINC00982-205ENST00000420957 435 ntBASIC14.41□□□□□ -0.1
SEC61A1P61619 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC14.41□□□□□ -0.1
SEC61A1P61619 AC007967.2-201ENST00000432613 625 ntBASIC14.41□□□□□ -0.1
SEC61A1P61619 AC009947.1-201ENST00000444350 727 ntBASIC14.41□□□□□ -0.1
SEC61A1P61619 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
SEC61A1P61619 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC14.41□□□□□ -0.1
SEC61A1P61619 ETFA-208ENST00000559602 792 ntTSL 3 BASIC14.41□□□□□ -0.1
SEC61A1P61619 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC14.41□□□□□ -0.1
SEC61A1P61619 AC140113.2-201ENST00000604370 208 ntBASIC14.41□□□□□ -0.1
SEC61A1P61619 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
SEC61A1P61619 AC005593.1-201ENST00000624894 515 ntBASIC14.41□□□□□ -0.1
SEC61A1P61619 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SEC61A1P61619 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SEC61A1P61619 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
SEC61A1P61619 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SEC61A1P61619 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SEC61A1P61619 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SEC61A1P61619 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SEC61A1P61619 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.41□□□□□ -0.1
SEC61A1P61619 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SEC61A1P61619 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
SEC61A1P61619 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SEC61A1P61619 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.41□□□□□ -0.1
SEC61A1P61619 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.41□□□□□ -0.1
SEC61A1P61619 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC14.41□□□□□ -0.1
SEC61A1P61619 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SEC61A1P61619 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC14.41□□□□□ -0.1
SEC61A1P61619 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SEC61A1P61619 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SEC61A1P61619 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC14.41□□□□□ -0.1
SEC61A1P61619 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC14.41□□□□□ -0.1
SEC61A1P61619 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms