Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.14■□□□□ 0.01
SMIM11AP58511 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.14■□□□□ 0.01
SMIM11AP58511 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.14■□□□□ 0.01
SMIM11AP58511 IRF8-202ENST00000562492 946 ntTSL 3 BASIC15.14■□□□□ 0.01
SMIM11AP58511 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.14■□□□□ 0.01
SMIM11AP58511 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SMIM11AP58511 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.14■□□□□ 0.01
SMIM11AP58511 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SMIM11AP58511 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SMIM11AP58511 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SMIM11AP58511 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SMIM11AP58511 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.14■□□□□ 0.01
SMIM11AP58511 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SMIM11AP58511 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.14■□□□□ 0.01
SMIM11AP58511 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SMIM11AP58511 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SMIM11AP58511 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SMIM11AP58511 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.14■□□□□ 0.01
SMIM11AP58511 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SMIM11AP58511 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.14■□□□□ 0.01
SMIM11AP58511 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SMIM11AP58511 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
SMIM11AP58511 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SMIM11AP58511 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SMIM11AP58511 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SMIM11AP58511 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SMIM11AP58511 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SMIM11AP58511 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SMIM11AP58511 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
SMIM11AP58511 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.13■□□□□ 0.01
SMIM11AP58511 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SMIM11AP58511 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.13■□□□□ 0.01
SMIM11AP58511 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SMIM11AP58511 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.13■□□□□ 0.01
SMIM11AP58511 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.13■□□□□ 0.01
SMIM11AP58511 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SMIM11AP58511 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.13■□□□□ 0.01
SMIM11AP58511 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SMIM11AP58511 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.13■□□□□ 0.01
SMIM11AP58511 RPS15P9-201ENST00000494093 319 ntBASIC15.13■□□□□ 0.01
SMIM11AP58511 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC15.13■□□□□ 0.01
SMIM11AP58511 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC15.13■□□□□ 0.01
SMIM11AP58511 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.13■□□□□ 0.01
SMIM11AP58511 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC15.13■□□□□ 0.01
SMIM11AP58511 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC15.13■□□□□ 0.01
SMIM11AP58511 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.13■□□□□ 0.01
SMIM11AP58511 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.13■□□□□ 0.01
SMIM11AP58511 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC15.13■□□□□ 0.01
SMIM11AP58511 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
SMIM11AP58511 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
SMIM11AP58511 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SMIM11AP58511 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.13■□□□□ 0.01
SMIM11AP58511 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SMIM11AP58511 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.13■□□□□ 0.01
SMIM11AP58511 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
SMIM11AP58511 PCDHA3-202ENST00000532566 4594 ntBASIC15.13■□□□□ 0.01
SMIM11AP58511 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.13■□□□□ 0.01
SMIM11AP58511 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SMIM11AP58511 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
SMIM11AP58511 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SMIM11AP58511 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
SMIM11AP58511 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.12■□□□□ 0.01
SMIM11AP58511 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.12■□□□□ 0.01
SMIM11AP58511 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SMIM11AP58511 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SMIM11AP58511 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SMIM11AP58511 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SMIM11AP58511 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SMIM11AP58511 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
SMIM11AP58511 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SMIM11AP58511 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SMIM11AP58511 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SMIM11AP58511 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SMIM11AP58511 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC15.12■□□□□ 0.01
SMIM11AP58511 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.12■□□□□ 0.01
SMIM11AP58511 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC15.12■□□□□ 0.01
SMIM11AP58511 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SMIM11AP58511 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SMIM11AP58511 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC15.12■□□□□ 0.01
SMIM11AP58511 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.12■□□□□ 0.01
SMIM11AP58511 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.12■□□□□ 0.01
SMIM11AP58511 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.12■□□□□ 0.01
SMIM11AP58511 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SMIM11AP58511 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.12■□□□□ 0.01
SMIM11AP58511 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SMIM11AP58511 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SMIM11AP58511 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SMIM11AP58511 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SMIM11AP58511 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SMIM11AP58511 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SMIM11AP58511 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.12■□□□□ 0.01
SMIM11AP58511 AC012569.1-201ENST00000591191 1524 ntBASIC15.12■□□□□ 0.01
SMIM11AP58511 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SMIM11AP58511 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
SMIM11AP58511 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SMIM11AP58511 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SMIM11AP58511 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.12■□□□□ 0.01
SMIM11AP58511 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SMIM11AP58511 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SMIM11AP58511 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms