Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CLDN2P57739 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN2P57739 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN2P57739 EDF1-203ENST00000371649 790 ntTSL 2 BASIC16.11■□□□□ 0.17
CLDN2P57739 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN2P57739 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN2P57739 WBP2-203ENST00000433525 928 ntTSL 2 BASIC16.11■□□□□ 0.17
CLDN2P57739 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.11■□□□□ 0.17
CLDN2P57739 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.11■□□□□ 0.17
CLDN2P57739 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN2P57739 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.11■□□□□ 0.17
CLDN2P57739 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.11■□□□□ 0.17
CLDN2P57739 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN2P57739 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.11■□□□□ 0.17
CLDN2P57739 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN2P57739 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.11■□□□□ 0.17
CLDN2P57739 AC012645.4-201ENST00000610691 1061 ntBASIC16.11■□□□□ 0.17
CLDN2P57739 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.11■□□□□ 0.17
CLDN2P57739 AC004840.1-201ENST00000636359 365 ntBASIC16.11■□□□□ 0.17
CLDN2P57739 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
CLDN2P57739 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN2P57739 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN2P57739 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN2P57739 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN2P57739 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN2P57739 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CLDN2P57739 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN2P57739 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN2P57739 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN2P57739 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.11■□□□□ 0.17
CLDN2P57739 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN2P57739 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN2P57739 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN2P57739 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN2P57739 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.11■□□□□ 0.17
CLDN2P57739 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN2P57739 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
CLDN2P57739 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN2P57739 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.1■□□□□ 0.17
CLDN2P57739 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN2P57739 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.1■□□□□ 0.17
CLDN2P57739 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN2P57739 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.1■□□□□ 0.17
CLDN2P57739 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN2P57739 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN2P57739 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
CLDN2P57739 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN2P57739 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN2P57739 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CLDN2P57739 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN2P57739 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN2P57739 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN2P57739 PIN1P1-201ENST00000412108 996 ntBASIC16.1■□□□□ 0.17
CLDN2P57739 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN2P57739 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN2P57739 AL512361.1-201ENST00000554200 418 ntBASIC16.1■□□□□ 0.17
CLDN2P57739 AC005225.4-201ENST00000557330 545 ntBASIC16.1■□□□□ 0.17
CLDN2P57739 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.1■□□□□ 0.17
CLDN2P57739 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN2P57739 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.1■□□□□ 0.17
CLDN2P57739 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CLDN2P57739 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CLDN2P57739 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CLDN2P57739 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN2P57739 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
CLDN2P57739 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.1■□□□□ 0.17
CLDN2P57739 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN2P57739 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CLDN2P57739 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.1■□□□□ 0.17
CLDN2P57739 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CLDN2P57739 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN2P57739 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN2P57739 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN2P57739 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CLDN2P57739 LINC01144-201ENST00000626198 1710 ntBASIC16.09■□□□□ 0.17
CLDN2P57739 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN2P57739 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.09■□□□□ 0.17
CLDN2P57739 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.09■□□□□ 0.17
CLDN2P57739 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.09■□□□□ 0.17
CLDN2P57739 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.09■□□□□ 0.17
CLDN2P57739 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.09■□□□□ 0.17
CLDN2P57739 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC16.09■□□□□ 0.17
CLDN2P57739 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.09■□□□□ 0.17
CLDN2P57739 AC135586.1-201ENST00000539323 574 ntBASIC16.09■□□□□ 0.17
CLDN2P57739 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN2P57739 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.09■□□□□ 0.17
CLDN2P57739 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.09■□□□□ 0.17
CLDN2P57739 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.09■□□□□ 0.17
CLDN2P57739 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CLDN2P57739 AL662799.1-202ENST00000614205 422 ntBASIC16.09■□□□□ 0.17
CLDN2P57739 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.09■□□□□ 0.17
CLDN2P57739 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
CLDN2P57739 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.09■□□□□ 0.17
CLDN2P57739 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.09■□□□□ 0.17
CLDN2P57739 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN2P57739 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN2P57739 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN2P57739 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN2P57739 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN2P57739 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms