Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
GFRA1P56159 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC14.61□□□□□ -0.07
GFRA1P56159 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
GFRA1P56159 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
GFRA1P56159 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
GFRA1P56159 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.61□□□□□ -0.07
GFRA1P56159 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GFRA1P56159 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.61□□□□□ -0.07
GFRA1P56159 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
GFRA1P56159 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.61□□□□□ -0.07
GFRA1P56159 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.61□□□□□ -0.07
GFRA1P56159 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.61□□□□□ -0.07
GFRA1P56159 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
GFRA1P56159 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.61□□□□□ -0.07
GFRA1P56159 AL589739.1-201ENST00000607720 493 ntBASIC14.61□□□□□ -0.07
GFRA1P56159 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
GFRA1P56159 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.61□□□□□ -0.07
GFRA1P56159 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GFRA1P56159 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GFRA1P56159 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.61□□□□□ -0.07
GFRA1P56159 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
GFRA1P56159 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.61□□□□□ -0.07
GFRA1P56159 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.61□□□□□ -0.07
GFRA1P56159 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GFRA1P56159 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
GFRA1P56159 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
GFRA1P56159 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC14.61□□□□□ -0.07
GFRA1P56159 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
GFRA1P56159 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GFRA1P56159 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
GFRA1P56159 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
GFRA1P56159 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
GFRA1P56159 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
GFRA1P56159 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC14.6□□□□□ -0.07
GFRA1P56159 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
GFRA1P56159 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.6□□□□□ -0.07
GFRA1P56159 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
GFRA1P56159 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
GFRA1P56159 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC14.6□□□□□ -0.07
GFRA1P56159 AC009053.2-201ENST00000563701 2365 ntBASIC14.6□□□□□ -0.07
GFRA1P56159 AC100757.3-201ENST00000622361 1406 ntBASIC14.6□□□□□ -0.07
GFRA1P56159 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
GFRA1P56159 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
GFRA1P56159 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.6□□□□□ -0.07
GFRA1P56159 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.6□□□□□ -0.07
GFRA1P56159 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GFRA1P56159 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.6□□□□□ -0.07
GFRA1P56159 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GFRA1P56159 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.6□□□□□ -0.07
GFRA1P56159 AC241585.1-201ENST00000433527 519 ntBASIC14.6□□□□□ -0.07
GFRA1P56159 AC245100.5-201ENST00000452108 331 ntBASIC14.6□□□□□ -0.07
GFRA1P56159 AL079307.3-201ENST00000556114 283 ntBASIC14.6□□□□□ -0.07
GFRA1P56159 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.6□□□□□ -0.07
GFRA1P56159 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.6□□□□□ -0.07
GFRA1P56159 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.6□□□□□ -0.07
GFRA1P56159 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
GFRA1P56159 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GFRA1P56159 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.6□□□□□ -0.07
GFRA1P56159 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
GFRA1P56159 AL590560.3-201ENST00000623350 461 ntBASIC14.6□□□□□ -0.07
GFRA1P56159 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GFRA1P56159 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GFRA1P56159 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
GFRA1P56159 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
GFRA1P56159 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC14.6□□□□□ -0.07
GFRA1P56159 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GFRA1P56159 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GFRA1P56159 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
GFRA1P56159 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
GFRA1P56159 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GFRA1P56159 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
GFRA1P56159 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
GFRA1P56159 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
GFRA1P56159 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
GFRA1P56159 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GFRA1P56159 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.6□□□□□ -0.07
GFRA1P56159 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.6□□□□□ -0.07
GFRA1P56159 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GFRA1P56159 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.59□□□□□ -0.07
GFRA1P56159 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
GFRA1P56159 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GFRA1P56159 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
GFRA1P56159 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GFRA1P56159 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.59□□□□□ -0.07
GFRA1P56159 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.59□□□□□ -0.07
GFRA1P56159 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
GFRA1P56159 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
GFRA1P56159 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.59□□□□□ -0.07
GFRA1P56159 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GFRA1P56159 CROCCP1-201ENST00000426910 5675 ntBASIC14.59□□□□□ -0.07
GFRA1P56159 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GFRA1P56159 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.59□□□□□ -0.07
GFRA1P56159 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
GFRA1P56159 RPL37AP1-201ENST00000412502 279 ntBASIC14.59□□□□□ -0.07
GFRA1P56159 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.59□□□□□ -0.07
GFRA1P56159 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
GFRA1P56159 AL080243.2-201ENST00000418783 582 ntBASIC14.59□□□□□ -0.07
GFRA1P56159 TSSK5P-201ENST00000423978 907 ntBASIC14.59□□□□□ -0.07
GFRA1P56159 AL139010.1-201ENST00000454878 894 ntBASIC14.59□□□□□ -0.07
GFRA1P56159 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms