Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
FOXG1P55316 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
FOXG1P55316 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
FOXG1P55316 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
FOXG1P55316 AL592424.1-201ENST00000563624 1536 ntBASIC14.32□□□□□ -0.12
FOXG1P55316 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
FOXG1P55316 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.32□□□□□ -0.12
FOXG1P55316 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
FOXG1P55316 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
FOXG1P55316 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
FOXG1P55316 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.32□□□□□ -0.12
FOXG1P55316 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.32□□□□□ -0.12
FOXG1P55316 CYMP-203ENST00000474680 1263 ntBASIC14.32□□□□□ -0.12
FOXG1P55316 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
FOXG1P55316 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.32□□□□□ -0.12
FOXG1P55316 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.32□□□□□ -0.12
FOXG1P55316 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.32□□□□□ -0.12
FOXG1P55316 BANF1P1-201ENST00000553684 263 ntBASIC14.32□□□□□ -0.12
FOXG1P55316 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.32□□□□□ -0.12
FOXG1P55316 AC061975.2-201ENST00000581722 295 ntBASIC14.32□□□□□ -0.12
FOXG1P55316 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.32□□□□□ -0.12
FOXG1P55316 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
FOXG1P55316 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
FOXG1P55316 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
FOXG1P55316 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
FOXG1P55316 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.32□□□□□ -0.12
FOXG1P55316 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
FOXG1P55316 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.32□□□□□ -0.12
FOXG1P55316 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.32□□□□□ -0.12
FOXG1P55316 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.31□□□□□ -0.12
FOXG1P55316 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
FOXG1P55316 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.31□□□□□ -0.12
FOXG1P55316 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
FOXG1P55316 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.31□□□□□ -0.12
FOXG1P55316 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.31□□□□□ -0.12
FOXG1P55316 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
FOXG1P55316 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.31□□□□□ -0.12
FOXG1P55316 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
FOXG1P55316 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
FOXG1P55316 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
FOXG1P55316 AC006449.5-201ENST00000610658 2098 ntBASIC14.31□□□□□ -0.12
FOXG1P55316 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
FOXG1P55316 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
FOXG1P55316 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
FOXG1P55316 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
FOXG1P55316 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
FOXG1P55316 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.31□□□□□ -0.12
FOXG1P55316 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.31□□□□□ -0.12
FOXG1P55316 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.31□□□□□ -0.12
FOXG1P55316 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.31□□□□□ -0.12
FOXG1P55316 AC051619.7-201ENST00000568314 623 ntBASIC14.31□□□□□ -0.12
FOXG1P55316 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.31□□□□□ -0.12
FOXG1P55316 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.31□□□□□ -0.12
FOXG1P55316 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.31□□□□□ -0.12
FOXG1P55316 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
FOXG1P55316 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
FOXG1P55316 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
FOXG1P55316 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
FOXG1P55316 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC14.31□□□□□ -0.12
FOXG1P55316 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
FOXG1P55316 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
FOXG1P55316 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
FOXG1P55316 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
FOXG1P55316 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
FOXG1P55316 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
FOXG1P55316 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.31□□□□□ -0.12
FOXG1P55316 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
FOXG1P55316 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
FOXG1P55316 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
FOXG1P55316 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
FOXG1P55316 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
FOXG1P55316 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.3□□□□□ -0.12
FOXG1P55316 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.3□□□□□ -0.12
FOXG1P55316 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
FOXG1P55316 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
FOXG1P55316 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
FOXG1P55316 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
FOXG1P55316 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC14.3□□□□□ -0.12
FOXG1P55316 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
FOXG1P55316 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14.3□□□□□ -0.12
FOXG1P55316 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.3□□□□□ -0.12
FOXG1P55316 SPDYE7P-202ENST00000420373 878 ntBASIC14.3□□□□□ -0.12
FOXG1P55316 FAM86GP-201ENST00000448322 971 ntBASIC14.3□□□□□ -0.12
FOXG1P55316 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.3□□□□□ -0.12
FOXG1P55316 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
FOXG1P55316 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.3□□□□□ -0.12
FOXG1P55316 AL390955.2-201ENST00000603032 514 ntBASIC14.3□□□□□ -0.12
FOXG1P55316 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
FOXG1P55316 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
FOXG1P55316 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
FOXG1P55316 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
FOXG1P55316 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
FOXG1P55316 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
FOXG1P55316 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.3□□□□□ -0.12
FOXG1P55316 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
FOXG1P55316 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.3□□□□□ -0.12
FOXG1P55316 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.3□□□□□ -0.12
FOXG1P55316 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
FOXG1P55316 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC14.3□□□□□ -0.12
FOXG1P55316 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms