Protein–RNA interactions for Protein: P55291

CDH15, Cadherin-15, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH15P55291 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.35■□□□□ 0.05
CDH15P55291 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.35■□□□□ 0.05
CDH15P55291 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CDH15P55291 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH15P55291 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH15P55291 AC004870.1-201ENST00000315132 882 ntBASIC15.35■□□□□ 0.05
CDH15P55291 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH15P55291 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH15P55291 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15.35■□□□□ 0.05
CDH15P55291 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
CDH15P55291 MTCL1P1-201ENST00000446207 792 ntBASIC15.35■□□□□ 0.05
CDH15P55291 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC15.35■□□□□ 0.05
CDH15P55291 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC15.35■□□□□ 0.05
CDH15P55291 RNF126P1-202ENST00000569893 925 ntBASIC15.35■□□□□ 0.05
CDH15P55291 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC15.35■□□□□ 0.05
CDH15P55291 ANKRD20A8P-203ENST00000641373 517 ntBASIC15.35■□□□□ 0.05
CDH15P55291 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH15P55291 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH15P55291 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDH15P55291 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH15P55291 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH15P55291 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDH15P55291 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH15P55291 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.35■□□□□ 0.05
CDH15P55291 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH15P55291 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC15.35■□□□□ 0.05
CDH15P55291 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH15P55291 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH15P55291 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDH15P55291 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CDH15P55291 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH15P55291 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDH15P55291 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.34■□□□□ 0.05
CDH15P55291 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH15P55291 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH15P55291 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH15P55291 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH15P55291 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH15P55291 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.34■□□□□ 0.05
CDH15P55291 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH15P55291 TBC1D3P5-201ENST00000579401 1545 ntBASIC15.34■□□□□ 0.05
CDH15P55291 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.34■□□□□ 0.05
CDH15P55291 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH15P55291 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDH15P55291 REXO1L8P-201ENST00000604378 1897 ntBASIC15.34■□□□□ 0.05
CDH15P55291 AC005089.1-201ENST00000619486 2241 ntBASIC15.34■□□□□ 0.05
CDH15P55291 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH15P55291 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC15.34■□□□□ 0.05
CDH15P55291 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH15P55291 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC15.34■□□□□ 0.05
CDH15P55291 DRAXINP1-201ENST00000437611 948 ntBASIC15.34■□□□□ 0.05
CDH15P55291 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC15.34■□□□□ 0.05
CDH15P55291 AP003733.1-201ENST00000491725 852 ntBASIC15.34■□□□□ 0.05
CDH15P55291 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDH15P55291 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC15.34■□□□□ 0.05
CDH15P55291 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC15.34■□□□□ 0.05
CDH15P55291 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC15.34■□□□□ 0.05
CDH15P55291 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.34■□□□□ 0.05
CDH15P55291 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH15P55291 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH15P55291 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.34■□□□□ 0.05
CDH15P55291 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.34■□□□□ 0.05
CDH15P55291 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH15P55291 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDH15P55291 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH15P55291 AC016027.1-202ENST00000607927 1699 ntBASIC15.34■□□□□ 0.05
CDH15P55291 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH15P55291 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH15P55291 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
CDH15P55291 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH15P55291 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH15P55291 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH15P55291 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
CDH15P55291 AL109954.1-202ENST00000564051 2148 ntBASIC15.34■□□□□ 0.05
CDH15P55291 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDH15P55291 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.34■□□□□ 0.05
CDH15P55291 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH15P55291 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.34■□□□□ 0.05
CDH15P55291 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH15P55291 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.33■□□□□ 0.05
CDH15P55291 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.33■□□□□ 0.05
CDH15P55291 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CDH15P55291 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CDH15P55291 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
CDH15P55291 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.05
CDH15P55291 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC15.33■□□□□ 0.05
CDH15P55291 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CDH15P55291 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH15P55291 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH15P55291 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH15P55291 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC15.33■□□□□ 0.04
CDH15P55291 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH15P55291 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC15.33■□□□□ 0.04
CDH15P55291 FAAHP1-202ENST00000446499 1238 ntBASIC15.33■□□□□ 0.04
CDH15P55291 DUX4L17-201ENST00000557360 1267 ntBASIC15.33■□□□□ 0.04
CDH15P55291 TPSP2-201ENST00000561760 610 ntBASIC15.33■□□□□ 0.04
CDH15P55291 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CDH15P55291 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC15.33■□□□□ 0.04
CDH15P55291 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC15.33■□□□□ 0.04
CDH15P55291 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms