Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC18.01■□□□□ 0.47
PMS1P54277 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PMS1P54277 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
PMS1P54277 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PMS1P54277 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC18.01■□□□□ 0.47
PMS1P54277 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC18.01■□□□□ 0.47
PMS1P54277 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
PMS1P54277 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC18■□□□□ 0.47
PMS1P54277 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
PMS1P54277 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
PMS1P54277 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC18■□□□□ 0.47
PMS1P54277 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC18■□□□□ 0.47
PMS1P54277 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC18■□□□□ 0.47
PMS1P54277 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PMS1P54277 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
PMS1P54277 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC18■□□□□ 0.47
PMS1P54277 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC18■□□□□ 0.47
PMS1P54277 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PMS1P54277 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18■□□□□ 0.47
PMS1P54277 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
PMS1P54277 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC18■□□□□ 0.47
PMS1P54277 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PMS1P54277 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
PMS1P54277 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
PMS1P54277 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PMS1P54277 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PMS1P54277 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PMS1P54277 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC18■□□□□ 0.47
PMS1P54277 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
PMS1P54277 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PMS1P54277 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC18■□□□□ 0.47
PMS1P54277 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
PMS1P54277 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC18■□□□□ 0.47
PMS1P54277 AP003680.1-201ENST00000598970 3660 ntBASIC18■□□□□ 0.47
PMS1P54277 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
PMS1P54277 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PMS1P54277 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PMS1P54277 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PMS1P54277 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.99■□□□□ 0.47
PMS1P54277 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
PMS1P54277 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PMS1P54277 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PMS1P54277 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.99■□□□□ 0.47
PMS1P54277 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PMS1P54277 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PMS1P54277 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.99■□□□□ 0.47
PMS1P54277 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PMS1P54277 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PMS1P54277 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PMS1P54277 KRT18P34-201ENST00000488218 1270 ntBASIC17.99■□□□□ 0.47
PMS1P54277 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
PMS1P54277 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
PMS1P54277 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.99■□□□□ 0.47
PMS1P54277 AP002472.1-201ENST00000577490 586 ntBASIC17.99■□□□□ 0.47
PMS1P54277 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.99■□□□□ 0.47
PMS1P54277 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PMS1P54277 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
PMS1P54277 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
PMS1P54277 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
PMS1P54277 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
PMS1P54277 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PMS1P54277 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
PMS1P54277 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
PMS1P54277 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.99■□□□□ 0.47
PMS1P54277 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
PMS1P54277 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PMS1P54277 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.98■□□□□ 0.47
PMS1P54277 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PMS1P54277 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.98■□□□□ 0.47
PMS1P54277 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
PMS1P54277 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
PMS1P54277 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PMS1P54277 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PMS1P54277 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PMS1P54277 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PMS1P54277 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.98■□□□□ 0.47
PMS1P54277 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.98■□□□□ 0.47
PMS1P54277 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.98■□□□□ 0.47
PMS1P54277 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.98■□□□□ 0.47
PMS1P54277 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.98■□□□□ 0.47
PMS1P54277 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PMS1P54277 PDPK2P-202ENST00000562415 1191 ntBASIC17.98■□□□□ 0.47
PMS1P54277 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.98■□□□□ 0.47
PMS1P54277 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.98■□□□□ 0.47
PMS1P54277 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
PMS1P54277 AC099522.2-201ENST00000607001 744 ntBASIC17.98■□□□□ 0.47
PMS1P54277 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PMS1P54277 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.98■□□□□ 0.47
PMS1P54277 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
PMS1P54277 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.98■□□□□ 0.47
PMS1P54277 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PMS1P54277 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PMS1P54277 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PMS1P54277 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.98■□□□□ 0.47
PMS1P54277 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PMS1P54277 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.98■□□□□ 0.47
PMS1P54277 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PMS1P54277 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.98■□□□□ 0.47
PMS1P54277 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.98■□□□□ 0.47
PMS1P54277 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms