Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.93□□□□□ -0.02
HMGA2P52926 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.93□□□□□ -0.02
HMGA2P52926 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.93□□□□□ -0.02
HMGA2P52926 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
HMGA2P52926 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HMGA2P52926 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HMGA2P52926 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.93□□□□□ -0.02
HMGA2P52926 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
HMGA2P52926 AKR1C7P-201ENST00000305623 895 ntBASIC14.93□□□□□ -0.02
HMGA2P52926 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC14.93□□□□□ -0.02
HMGA2P52926 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.93□□□□□ -0.02
HMGA2P52926 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.93□□□□□ -0.02
HMGA2P52926 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC14.93□□□□□ -0.02
HMGA2P52926 SAPCD2P3-201ENST00000455031 850 ntBASIC14.93□□□□□ -0.02
HMGA2P52926 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HMGA2P52926 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.93□□□□□ -0.02
HMGA2P52926 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC14.93□□□□□ -0.02
HMGA2P52926 AF238378.1-201ENST00000526806 358 ntBASIC14.93□□□□□ -0.02
HMGA2P52926 CYB561-216ENST00000582297 897 ntTSL 3 BASIC14.93□□□□□ -0.02
HMGA2P52926 TBCB-205ENST00000585746 875 ntTSL 3 BASIC14.93□□□□□ -0.02
HMGA2P52926 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.93□□□□□ -0.02
HMGA2P52926 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC14.93□□□□□ -0.02
HMGA2P52926 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HMGA2P52926 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HMGA2P52926 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
HMGA2P52926 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
HMGA2P52926 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
HMGA2P52926 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HMGA2P52926 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.93□□□□□ -0.02
HMGA2P52926 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC14.93□□□□□ -0.02
HMGA2P52926 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
HMGA2P52926 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
HMGA2P52926 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
HMGA2P52926 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
HMGA2P52926 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HMGA2P52926 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.93□□□□□ -0.02
HMGA2P52926 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
HMGA2P52926 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
HMGA2P52926 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HMGA2P52926 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
HMGA2P52926 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
HMGA2P52926 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
HMGA2P52926 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HMGA2P52926 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HMGA2P52926 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC14.92□□□□□ -0.02
HMGA2P52926 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HMGA2P52926 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HMGA2P52926 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HMGA2P52926 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.92□□□□□ -0.02
HMGA2P52926 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
HMGA2P52926 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.92□□□□□ -0.02
HMGA2P52926 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC14.92□□□□□ -0.02
HMGA2P52926 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HMGA2P52926 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HMGA2P52926 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HMGA2P52926 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
HMGA2P52926 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HMGA2P52926 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.92□□□□□ -0.02
HMGA2P52926 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HMGA2P52926 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HMGA2P52926 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
HMGA2P52926 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HMGA2P52926 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HMGA2P52926 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
HMGA2P52926 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.92□□□□□ -0.02
HMGA2P52926 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
HMGA2P52926 MRPL20P1-201ENST00000400819 433 ntBASIC14.92□□□□□ -0.02
HMGA2P52926 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC14.92□□□□□ -0.02
HMGA2P52926 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HMGA2P52926 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC14.92□□□□□ -0.02
HMGA2P52926 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC14.92□□□□□ -0.02
HMGA2P52926 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC14.92□□□□□ -0.02
HMGA2P52926 OR7E14P-202ENST00000530490 1290 ntBASIC14.92□□□□□ -0.02
HMGA2P52926 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC14.92□□□□□ -0.02
HMGA2P52926 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC14.92□□□□□ -0.02
HMGA2P52926 ARL16-209ENST00000573715 763 ntTSL 3 BASIC14.92□□□□□ -0.02
HMGA2P52926 ARL16-211ENST00000576135 694 ntTSL 3 BASIC14.92□□□□□ -0.02
HMGA2P52926 AL031055.1-201ENST00000606362 631 ntBASIC14.92□□□□□ -0.02
HMGA2P52926 AL365330.1-201ENST00000607459 531 ntBASIC14.92□□□□□ -0.02
HMGA2P52926 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
HMGA2P52926 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
HMGA2P52926 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.92□□□□□ -0.02
HMGA2P52926 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
HMGA2P52926 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.92□□□□□ -0.02
HMGA2P52926 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HMGA2P52926 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.92□□□□□ -0.02
HMGA2P52926 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HMGA2P52926 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HMGA2P52926 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HMGA2P52926 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
HMGA2P52926 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.92□□□□□ -0.02
HMGA2P52926 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HMGA2P52926 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HMGA2P52926 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.92□□□□□ -0.02
HMGA2P52926 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HMGA2P52926 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HMGA2P52926 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.92□□□□□ -0.02
HMGA2P52926 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
HMGA2P52926 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.92□□□□□ -0.02
HMGA2P52926 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms