Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
GTF2A1P52655 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
GTF2A1P52655 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
GTF2A1P52655 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
GTF2A1P52655 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC16.13■□□□□ 0.17
GTF2A1P52655 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC16.13■□□□□ 0.17
GTF2A1P52655 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
GTF2A1P52655 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
GTF2A1P52655 AC133681.1-201ENST00000465482 601 ntBASIC16.13■□□□□ 0.17
GTF2A1P52655 AC011506.1-201ENST00000474329 610 ntBASIC16.13■□□□□ 0.17
GTF2A1P52655 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.13■□□□□ 0.17
GTF2A1P52655 FDX2-207ENST00000494368 584 ntTSL 4 BASIC16.13■□□□□ 0.17
GTF2A1P52655 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
GTF2A1P52655 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
GTF2A1P52655 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
GTF2A1P52655 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
GTF2A1P52655 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
GTF2A1P52655 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
GTF2A1P52655 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
GTF2A1P52655 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.13■□□□□ 0.17
GTF2A1P52655 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
GTF2A1P52655 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
GTF2A1P52655 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
GTF2A1P52655 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
GTF2A1P52655 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
GTF2A1P52655 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
GTF2A1P52655 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.13■□□□□ 0.17
GTF2A1P52655 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
GTF2A1P52655 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.13■□□□□ 0.17
GTF2A1P52655 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC16.12■□□□□ 0.17
GTF2A1P52655 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.12■□□□□ 0.17
GTF2A1P52655 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
GTF2A1P52655 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
GTF2A1P52655 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
GTF2A1P52655 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
GTF2A1P52655 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC16.12■□□□□ 0.17
GTF2A1P52655 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC16.12■□□□□ 0.17
GTF2A1P52655 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
GTF2A1P52655 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
GTF2A1P52655 PPT1-213ENST00000641319 2388 ntBASIC16.12■□□□□ 0.17
GTF2A1P52655 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.12■□□□□ 0.17
GTF2A1P52655 CES1P1-201ENST00000421606 1704 ntBASIC16.12■□□□□ 0.17
GTF2A1P52655 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
GTF2A1P52655 AL355802.2-201ENST00000402069 882 ntBASIC16.12■□□□□ 0.17
GTF2A1P52655 MCCD1P1-208ENST00000445732 328 ntBASIC16.12■□□□□ 0.17
GTF2A1P52655 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
GTF2A1P52655 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC16.12■□□□□ 0.17
GTF2A1P52655 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.12■□□□□ 0.17
GTF2A1P52655 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
GTF2A1P52655 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.12■□□□□ 0.17
GTF2A1P52655 AL031985.4-201ENST00000642138 673 ntBASIC16.12■□□□□ 0.17
GTF2A1P52655 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
GTF2A1P52655 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
GTF2A1P52655 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
GTF2A1P52655 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GTF2A1P52655 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC16.12■□□□□ 0.17
GTF2A1P52655 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC16.12■□□□□ 0.17
GTF2A1P52655 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GTF2A1P52655 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
GTF2A1P52655 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
GTF2A1P52655 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
GTF2A1P52655 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
GTF2A1P52655 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GTF2A1P52655 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
GTF2A1P52655 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
GTF2A1P52655 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
GTF2A1P52655 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
GTF2A1P52655 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
GTF2A1P52655 TMBIM7P-203ENST00000641617 1718 ntBASIC16.11■□□□□ 0.17
GTF2A1P52655 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
GTF2A1P52655 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
GTF2A1P52655 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
GTF2A1P52655 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GTF2A1P52655 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
GTF2A1P52655 TNN-203ENST00000622870 3719 ntTSL 5 BASIC16.11■□□□□ 0.17
GTF2A1P52655 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.11■□□□□ 0.17
GTF2A1P52655 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GTF2A1P52655 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GTF2A1P52655 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GTF2A1P52655 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GTF2A1P52655 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
GTF2A1P52655 ISG20-202ENST00000379224 540 ntTSL 3 BASIC16.11■□□□□ 0.17
GTF2A1P52655 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
GTF2A1P52655 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GTF2A1P52655 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GTF2A1P52655 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC16.11■□□□□ 0.17
GTF2A1P52655 MMAB-206ENST00000540016 945 ntTSL 3 BASIC16.11■□□□□ 0.17
GTF2A1P52655 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
GTF2A1P52655 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.11■□□□□ 0.17
GTF2A1P52655 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC16.11■□□□□ 0.17
GTF2A1P52655 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GTF2A1P52655 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
GTF2A1P52655 AL391256.1-201ENST00000443260 1855 ntBASIC16.11■□□□□ 0.17
GTF2A1P52655 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GTF2A1P52655 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC16.11■□□□□ 0.17
GTF2A1P52655 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
GTF2A1P52655 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
GTF2A1P52655 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GTF2A1P52655 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GTF2A1P52655 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms