Protein–RNA interactions for Protein: P48556

PSMD8, 26S proteasome non-ATPase regulatory subunit 8, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD8P48556 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PSMD8P48556 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PSMD8P48556 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PSMD8P48556 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.65■□□□□ 0.26
PSMD8P48556 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.65■□□□□ 0.26
PSMD8P48556 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PSMD8P48556 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.65■□□□□ 0.26
PSMD8P48556 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.65■□□□□ 0.26
PSMD8P48556 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.65■□□□□ 0.26
PSMD8P48556 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.64■□□□□ 0.26
PSMD8P48556 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
PSMD8P48556 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
PSMD8P48556 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
PSMD8P48556 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PSMD8P48556 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.64■□□□□ 0.25
PSMD8P48556 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PSMD8P48556 AC073439.1-201ENST00000624121 1774 ntBASIC16.64■□□□□ 0.25
PSMD8P48556 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PSMD8P48556 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PSMD8P48556 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.64■□□□□ 0.25
PSMD8P48556 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.64■□□□□ 0.25
PSMD8P48556 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PSMD8P48556 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.64■□□□□ 0.25
PSMD8P48556 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PSMD8P48556 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.64■□□□□ 0.25
PSMD8P48556 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PSMD8P48556 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PSMD8P48556 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PSMD8P48556 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.64■□□□□ 0.25
PSMD8P48556 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PSMD8P48556 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.64■□□□□ 0.25
PSMD8P48556 BASP1P1-201ENST00000430708 665 ntBASIC16.64■□□□□ 0.25
PSMD8P48556 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PSMD8P48556 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.64■□□□□ 0.25
PSMD8P48556 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.64■□□□□ 0.25
PSMD8P48556 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.64■□□□□ 0.25
PSMD8P48556 RNA5SP421-201ENST00000516864 134 ntBASIC16.64■□□□□ 0.25
PSMD8P48556 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.64■□□□□ 0.25
PSMD8P48556 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.64■□□□□ 0.25
PSMD8P48556 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.64■□□□□ 0.25
PSMD8P48556 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PSMD8P48556 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PSMD8P48556 AC003101.2-201ENST00000612557 442 ntBASIC16.64■□□□□ 0.25
PSMD8P48556 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PSMD8P48556 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PSMD8P48556 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
PSMD8P48556 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PSMD8P48556 LINC02199-201ENST00000506655 2702 ntBASIC16.64■□□□□ 0.25
PSMD8P48556 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.64■□□□□ 0.25
PSMD8P48556 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PSMD8P48556 AC011270.2-201ENST00000624293 2550 ntBASIC16.64■□□□□ 0.25
PSMD8P48556 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PSMD8P48556 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PSMD8P48556 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PSMD8P48556 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PSMD8P48556 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PSMD8P48556 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
PSMD8P48556 AP3S2-216ENST00000617003 1561 ntBASIC16.64■□□□□ 0.25
PSMD8P48556 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PSMD8P48556 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PSMD8P48556 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PSMD8P48556 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
PSMD8P48556 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PSMD8P48556 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.63■□□□□ 0.25
PSMD8P48556 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PSMD8P48556 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PSMD8P48556 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PSMD8P48556 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PSMD8P48556 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PSMD8P48556 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PSMD8P48556 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
PSMD8P48556 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PSMD8P48556 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.63■□□□□ 0.25
PSMD8P48556 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
PSMD8P48556 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PSMD8P48556 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.63■□□□□ 0.25
PSMD8P48556 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.63■□□□□ 0.25
PSMD8P48556 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.63■□□□□ 0.25
PSMD8P48556 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.63■□□□□ 0.25
PSMD8P48556 INGX-202ENST00000489074 768 ntBASIC16.63■□□□□ 0.25
PSMD8P48556 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PSMD8P48556 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.63■□□□□ 0.25
PSMD8P48556 AC069120.2-201ENST00000524091 540 ntBASIC16.63■□□□□ 0.25
PSMD8P48556 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.63■□□□□ 0.25
PSMD8P48556 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.63■□□□□ 0.25
PSMD8P48556 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PSMD8P48556 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.63■□□□□ 0.25
PSMD8P48556 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.63■□□□□ 0.25
PSMD8P48556 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
PSMD8P48556 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PSMD8P48556 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
PSMD8P48556 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
PSMD8P48556 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PSMD8P48556 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PSMD8P48556 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PSMD8P48556 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PSMD8P48556 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
PSMD8P48556 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PSMD8P48556 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.63■□□□□ 0.25
PSMD8P48556 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms