Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NEDD4P46934 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC19.21■□□□□ 0.67
NEDD4P46934 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
NEDD4P46934 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC19.21■□□□□ 0.67
NEDD4P46934 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC19.21■□□□□ 0.67
NEDD4P46934 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NEDD4P46934 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NEDD4P46934 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NEDD4P46934 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC19.21■□□□□ 0.67
NEDD4P46934 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NEDD4P46934 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
NEDD4P46934 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NEDD4P46934 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
NEDD4P46934 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NEDD4P46934 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC19.21■□□□□ 0.67
NEDD4P46934 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NEDD4P46934 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NEDD4P46934 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC19.21■□□□□ 0.67
NEDD4P46934 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NEDD4P46934 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC19.21■□□□□ 0.67
NEDD4P46934 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC19.21■□□□□ 0.67
NEDD4P46934 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC19.21■□□□□ 0.67
NEDD4P46934 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NEDD4P46934 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
NEDD4P46934 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC19.21■□□□□ 0.67
NEDD4P46934 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NEDD4P46934 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
NEDD4P46934 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NEDD4P46934 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NEDD4P46934 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
NEDD4P46934 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
NEDD4P46934 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NEDD4P46934 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NEDD4P46934 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
NEDD4P46934 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NEDD4P46934 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NEDD4P46934 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
NEDD4P46934 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NEDD4P46934 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC19.2■□□□□ 0.66
NEDD4P46934 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NEDD4P46934 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
NEDD4P46934 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NEDD4P46934 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
NEDD4P46934 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
NEDD4P46934 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NEDD4P46934 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC19.2■□□□□ 0.66
NEDD4P46934 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC19.2■□□□□ 0.66
NEDD4P46934 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC19.2■□□□□ 0.66
NEDD4P46934 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NEDD4P46934 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NEDD4P46934 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NEDD4P46934 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NEDD4P46934 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NEDD4P46934 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
NEDD4P46934 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NEDD4P46934 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
NEDD4P46934 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
NEDD4P46934 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NEDD4P46934 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
NEDD4P46934 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC19.19■□□□□ 0.66
NEDD4P46934 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NEDD4P46934 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
NEDD4P46934 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NEDD4P46934 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC19.19■□□□□ 0.66
NEDD4P46934 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC19.19■□□□□ 0.66
NEDD4P46934 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC19.19■□□□□ 0.66
NEDD4P46934 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NEDD4P46934 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC19.19■□□□□ 0.66
NEDD4P46934 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NEDD4P46934 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
NEDD4P46934 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NEDD4P46934 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
NEDD4P46934 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
NEDD4P46934 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC19.19■□□□□ 0.66
NEDD4P46934 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NEDD4P46934 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC19.19■□□□□ 0.66
NEDD4P46934 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
NEDD4P46934 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NEDD4P46934 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC19.19■□□□□ 0.66
NEDD4P46934 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC19.19■□□□□ 0.66
NEDD4P46934 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC19.19■□□□□ 0.66
NEDD4P46934 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC19.19■□□□□ 0.66
NEDD4P46934 AL365330.1-201ENST00000607459 531 ntBASIC19.19■□□□□ 0.66
NEDD4P46934 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC19.19■□□□□ 0.66
NEDD4P46934 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC19.19■□□□□ 0.66
NEDD4P46934 SP100-205ENST00000409824 1802 ntTSL 5 BASIC19.19■□□□□ 0.66
NEDD4P46934 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC19.19■□□□□ 0.66
NEDD4P46934 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
NEDD4P46934 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NEDD4P46934 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NEDD4P46934 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
NEDD4P46934 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
NEDD4P46934 CICP6-201ENST00000457191 2729 ntBASIC19.18■□□□□ 0.66
NEDD4P46934 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
NEDD4P46934 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NEDD4P46934 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NEDD4P46934 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC19.18■□□□□ 0.66
NEDD4P46934 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
NEDD4P46934 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NEDD4P46934 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms