Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC17.34■□□□□ 0.37
BRCC3P46736 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC17.34■□□□□ 0.37
BRCC3P46736 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.34■□□□□ 0.37
BRCC3P46736 AC079328.2-201ENST00000561241 3354 ntBASIC17.34■□□□□ 0.37
BRCC3P46736 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
BRCC3P46736 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
BRCC3P46736 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.33■□□□□ 0.37
BRCC3P46736 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.33■□□□□ 0.37
BRCC3P46736 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
BRCC3P46736 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC17.33■□□□□ 0.37
BRCC3P46736 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
BRCC3P46736 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
BRCC3P46736 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
BRCC3P46736 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
BRCC3P46736 AC020916.1-201ENST00000587762 1774 ntBASIC17.33■□□□□ 0.37
BRCC3P46736 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
BRCC3P46736 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
BRCC3P46736 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
BRCC3P46736 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
BRCC3P46736 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.33■□□□□ 0.37
BRCC3P46736 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.33■□□□□ 0.37
BRCC3P46736 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
BRCC3P46736 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
BRCC3P46736 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.33■□□□□ 0.36
BRCC3P46736 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
BRCC3P46736 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
BRCC3P46736 CRB3P1-201ENST00000449338 276 ntBASIC17.33■□□□□ 0.36
BRCC3P46736 AL139010.1-201ENST00000454878 894 ntBASIC17.33■□□□□ 0.36
BRCC3P46736 RN7SL618P-201ENST00000477850 296 ntBASIC17.33■□□□□ 0.36
BRCC3P46736 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
BRCC3P46736 AC044860.1-202ENST00000559481 777 ntBASIC17.33■□□□□ 0.36
BRCC3P46736 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
BRCC3P46736 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC17.33■□□□□ 0.36
BRCC3P46736 MIR4321-201ENST00000592276 80 ntBASIC17.33■□□□□ 0.36
BRCC3P46736 AC004233.3-201ENST00000607794 1269 ntBASIC17.33■□□□□ 0.36
BRCC3P46736 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
BRCC3P46736 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.33■□□□□ 0.36
BRCC3P46736 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
BRCC3P46736 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
BRCC3P46736 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
BRCC3P46736 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17.33■□□□□ 0.36
BRCC3P46736 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.33■□□□□ 0.36
BRCC3P46736 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
BRCC3P46736 AL136982.4-201ENST00000437689 1740 ntBASIC17.33■□□□□ 0.36
BRCC3P46736 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BRCC3P46736 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BRCC3P46736 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
BRCC3P46736 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BRCC3P46736 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
BRCC3P46736 KRT8P12-202ENST00000472924 1397 ntBASIC17.32■□□□□ 0.36
BRCC3P46736 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BRCC3P46736 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BRCC3P46736 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.32■□□□□ 0.36
BRCC3P46736 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
BRCC3P46736 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BRCC3P46736 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
BRCC3P46736 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BRCC3P46736 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
BRCC3P46736 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC17.32■□□□□ 0.36
BRCC3P46736 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC17.32■□□□□ 0.36
BRCC3P46736 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC17.32■□□□□ 0.36
BRCC3P46736 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC17.32■□□□□ 0.36
BRCC3P46736 COX11-202ENST00000571584 1108 ntTSL 2 BASIC17.32■□□□□ 0.36
BRCC3P46736 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC17.32■□□□□ 0.36
BRCC3P46736 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BRCC3P46736 AC009053.2-201ENST00000563701 2365 ntBASIC17.32■□□□□ 0.36
BRCC3P46736 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BRCC3P46736 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
BRCC3P46736 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
BRCC3P46736 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
BRCC3P46736 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.32■□□□□ 0.36
BRCC3P46736 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BRCC3P46736 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
BRCC3P46736 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.32■□□□□ 0.36
BRCC3P46736 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
BRCC3P46736 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
BRCC3P46736 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
BRCC3P46736 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.31■□□□□ 0.36
BRCC3P46736 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BRCC3P46736 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
BRCC3P46736 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BRCC3P46736 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BRCC3P46736 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
BRCC3P46736 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
BRCC3P46736 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
BRCC3P46736 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BRCC3P46736 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BRCC3P46736 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BRCC3P46736 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BRCC3P46736 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BRCC3P46736 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC17.31■□□□□ 0.36
BRCC3P46736 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
BRCC3P46736 PIN1P1-201ENST00000412108 996 ntBASIC17.31■□□□□ 0.36
BRCC3P46736 SPDYE17-201ENST00000412399 783 ntBASIC17.31■□□□□ 0.36
BRCC3P46736 POU5F1P6-201ENST00000466990 990 ntBASIC17.31■□□□□ 0.36
BRCC3P46736 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC17.31■□□□□ 0.36
BRCC3P46736 AP005018.1-201ENST00000525475 301 ntBASIC17.31■□□□□ 0.36
BRCC3P46736 AC135586.1-201ENST00000539323 574 ntBASIC17.31■□□□□ 0.36
BRCC3P46736 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC17.31■□□□□ 0.36
BRCC3P46736 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms