Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SSR1P43307 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SSR1P43307 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SSR1P43307 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.51■□□□□ 0.39
SSR1P43307 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SSR1P43307 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SSR1P43307 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SSR1P43307 AL031731.1-201ENST00000642131 2094 ntBASIC17.51■□□□□ 0.39
SSR1P43307 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SSR1P43307 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SSR1P43307 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
SSR1P43307 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
SSR1P43307 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SSR1P43307 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.5■□□□□ 0.39
SSR1P43307 AC026691.1-201ENST00000602502 2017 ntBASIC17.5■□□□□ 0.39
SSR1P43307 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
SSR1P43307 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.5■□□□□ 0.39
SSR1P43307 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
SSR1P43307 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.5■□□□□ 0.39
SSR1P43307 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC17.5■□□□□ 0.39
SSR1P43307 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SSR1P43307 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.5■□□□□ 0.39
SSR1P43307 AL450487.1-201ENST00000426799 995 ntBASIC17.5■□□□□ 0.39
SSR1P43307 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SSR1P43307 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SSR1P43307 IGHV3-65-201ENST00000523210 341 ntBASIC17.5■□□□□ 0.39
SSR1P43307 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.5■□□□□ 0.39
SSR1P43307 AC005412.3-201ENST00000580309 715 ntBASIC17.5■□□□□ 0.39
SSR1P43307 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.5■□□□□ 0.39
SSR1P43307 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SSR1P43307 PGM5P2-202ENST00000637225 1043 ntBASIC17.5■□□□□ 0.39
SSR1P43307 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.5■□□□□ 0.39
SSR1P43307 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SSR1P43307 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SSR1P43307 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SSR1P43307 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
SSR1P43307 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SSR1P43307 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SSR1P43307 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
SSR1P43307 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
SSR1P43307 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.5■□□□□ 0.39
SSR1P43307 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SSR1P43307 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
SSR1P43307 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SSR1P43307 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SSR1P43307 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.5■□□□□ 0.39
SSR1P43307 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SSR1P43307 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SSR1P43307 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SSR1P43307 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SSR1P43307 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SSR1P43307 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SSR1P43307 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SSR1P43307 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SSR1P43307 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SSR1P43307 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SSR1P43307 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SSR1P43307 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SSR1P43307 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SSR1P43307 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.49■□□□□ 0.39
SSR1P43307 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.49■□□□□ 0.39
SSR1P43307 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SSR1P43307 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.49■□□□□ 0.39
SSR1P43307 AC108073.2-201ENST00000464002 357 ntBASIC17.49■□□□□ 0.39
SSR1P43307 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.49■□□□□ 0.39
SSR1P43307 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.49■□□□□ 0.39
SSR1P43307 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.49■□□□□ 0.39
SSR1P43307 MIR4751-201ENST00000578027 74 ntBASIC17.49■□□□□ 0.39
SSR1P43307 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.49■□□□□ 0.39
SSR1P43307 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SSR1P43307 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.49■□□□□ 0.39
SSR1P43307 AL031008.1-201ENST00000619963 541 ntBASIC17.49■□□□□ 0.39
SSR1P43307 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SSR1P43307 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SSR1P43307 BID-213ENST00000615414 2236 ntTSL 5 BASIC17.49■□□□□ 0.39
SSR1P43307 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.49■□□□□ 0.39
SSR1P43307 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SSR1P43307 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
SSR1P43307 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SSR1P43307 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SSR1P43307 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SSR1P43307 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SSR1P43307 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC17.48■□□□□ 0.39
SSR1P43307 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SSR1P43307 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
SSR1P43307 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
SSR1P43307 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SSR1P43307 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SSR1P43307 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SSR1P43307 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.48■□□□□ 0.39
SSR1P43307 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.48■□□□□ 0.39
SSR1P43307 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SSR1P43307 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SSR1P43307 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SSR1P43307 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SSR1P43307 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SSR1P43307 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.48■□□□□ 0.39
SSR1P43307 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.48■□□□□ 0.39
SSR1P43307 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SSR1P43307 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms