Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TNFSF9P41273 MIR4321-201ENST00000592276 80 ntBASIC17.65■□□□□ 0.42
TNFSF9P41273 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC17.65■□□□□ 0.42
TNFSF9P41273 COQ4-205ENST00000609948 956 ntTSL 2 BASIC17.65■□□□□ 0.42
TNFSF9P41273 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TNFSF9P41273 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TNFSF9P41273 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
TNFSF9P41273 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TNFSF9P41273 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TNFSF9P41273 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
TNFSF9P41273 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TNFSF9P41273 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TNFSF9P41273 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
TNFSF9P41273 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
TNFSF9P41273 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.42
TNFSF9P41273 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
TNFSF9P41273 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
TNFSF9P41273 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
TNFSF9P41273 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
TNFSF9P41273 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TNFSF9P41273 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TNFSF9P41273 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
TNFSF9P41273 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TNFSF9P41273 AC006449.6-201ENST00000612330 2296 ntBASIC17.64■□□□□ 0.41
TNFSF9P41273 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.64■□□□□ 0.41
TNFSF9P41273 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
TNFSF9P41273 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.64■□□□□ 0.41
TNFSF9P41273 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TNFSF9P41273 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.64■□□□□ 0.41
TNFSF9P41273 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TNFSF9P41273 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TNFSF9P41273 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TNFSF9P41273 AC092580.3-201ENST00000430932 139 ntBASIC17.64■□□□□ 0.41
TNFSF9P41273 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
TNFSF9P41273 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
TNFSF9P41273 SATB1-217ENST00000493952 626 ntTSL 3 BASIC17.64■□□□□ 0.41
TNFSF9P41273 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TNFSF9P41273 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.64■□□□□ 0.41
TNFSF9P41273 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.64■□□□□ 0.41
TNFSF9P41273 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.64■□□□□ 0.41
TNFSF9P41273 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.64■□□□□ 0.41
TNFSF9P41273 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TNFSF9P41273 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TNFSF9P41273 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.64■□□□□ 0.41
TNFSF9P41273 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TNFSF9P41273 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TNFSF9P41273 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TNFSF9P41273 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
TNFSF9P41273 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TNFSF9P41273 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
TNFSF9P41273 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
TNFSF9P41273 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.64■□□□□ 0.41
TNFSF9P41273 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
TNFSF9P41273 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
TNFSF9P41273 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TNFSF9P41273 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TNFSF9P41273 AC006449.5-201ENST00000610658 2098 ntBASIC17.63■□□□□ 0.41
TNFSF9P41273 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
TNFSF9P41273 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.63■□□□□ 0.41
TNFSF9P41273 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TNFSF9P41273 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TNFSF9P41273 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
TNFSF9P41273 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TNFSF9P41273 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
TNFSF9P41273 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TNFSF9P41273 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TNFSF9P41273 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.63■□□□□ 0.41
TNFSF9P41273 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TNFSF9P41273 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TNFSF9P41273 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TNFSF9P41273 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
TNFSF9P41273 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
TNFSF9P41273 MTND6P24-201ENST00000440466 518 ntBASIC17.63■□□□□ 0.41
TNFSF9P41273 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.63■□□□□ 0.41
TNFSF9P41273 AC069120.2-201ENST00000524091 540 ntBASIC17.63■□□□□ 0.41
TNFSF9P41273 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC17.63■□□□□ 0.41
TNFSF9P41273 NAA38-207ENST00000576861 556 ntTSL 3 BASIC17.63■□□□□ 0.41
TNFSF9P41273 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
TNFSF9P41273 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
TNFSF9P41273 AL365330.1-201ENST00000607459 531 ntBASIC17.63■□□□□ 0.41
TNFSF9P41273 RN7SL828P-201ENST00000607615 303 ntBASIC17.63■□□□□ 0.41
TNFSF9P41273 AL133215.2-201ENST00000609242 977 ntBASIC17.63■□□□□ 0.41
TNFSF9P41273 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TNFSF9P41273 SPDYE12P-201ENST00000618416 771 ntBASIC17.63■□□□□ 0.41
TNFSF9P41273 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TNFSF9P41273 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TNFSF9P41273 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TNFSF9P41273 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TNFSF9P41273 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TNFSF9P41273 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TNFSF9P41273 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TNFSF9P41273 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.63■□□□□ 0.41
TNFSF9P41273 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TNFSF9P41273 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TNFSF9P41273 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.63■□□□□ 0.41
TNFSF9P41273 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
TNFSF9P41273 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.63■□□□□ 0.41
TNFSF9P41273 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TNFSF9P41273 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.62■□□□□ 0.41
TNFSF9P41273 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms