Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RORAP35398 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
RORAP35398 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
RORAP35398 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RORAP35398 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
RORAP35398 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RORAP35398 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
RORAP35398 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
RORAP35398 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
RORAP35398 AL603756.1-201ENST00000606511 2163 ntBASIC15.55■□□□□ 0.08
RORAP35398 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RORAP35398 AC078925.2-201ENST00000624013 1973 ntBASIC15.55■□□□□ 0.08
RORAP35398 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RORAP35398 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RORAP35398 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.55■□□□□ 0.08
RORAP35398 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RORAP35398 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.55■□□□□ 0.08
RORAP35398 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RORAP35398 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RORAP35398 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
RORAP35398 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.55■□□□□ 0.08
RORAP35398 UGT1A2P-201ENST00000454886 866 ntBASIC15.55■□□□□ 0.08
RORAP35398 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
RORAP35398 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.55■□□□□ 0.08
RORAP35398 AC138761.1-201ENST00000584393 385 ntBASIC15.55■□□□□ 0.08
RORAP35398 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.55■□□□□ 0.08
RORAP35398 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.55■□□□□ 0.08
RORAP35398 AC003101.2-201ENST00000612557 442 ntBASIC15.55■□□□□ 0.08
RORAP35398 AC073592.8-201ENST00000624126 511 ntBASIC15.55■□□□□ 0.08
RORAP35398 NFIC-211ENST00000641145 8399 ntBASIC15.55■□□□□ 0.08
RORAP35398 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RORAP35398 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RORAP35398 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RORAP35398 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.55■□□□□ 0.08
RORAP35398 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RORAP35398 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RORAP35398 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RORAP35398 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RORAP35398 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RORAP35398 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RORAP35398 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.55■□□□□ 0.08
RORAP35398 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
RORAP35398 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.55■□□□□ 0.08
RORAP35398 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RORAP35398 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.54■□□□□ 0.08
RORAP35398 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RORAP35398 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.54■□□□□ 0.08
RORAP35398 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RORAP35398 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
RORAP35398 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
RORAP35398 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RORAP35398 RNF216P1-203ENST00000404404 2427 ntBASIC15.54■□□□□ 0.08
RORAP35398 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.54■□□□□ 0.08
RORAP35398 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RORAP35398 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
RORAP35398 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RORAP35398 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
RORAP35398 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RORAP35398 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15.54■□□□□ 0.08
RORAP35398 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RORAP35398 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RORAP35398 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.54■□□□□ 0.08
RORAP35398 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.54■□□□□ 0.08
RORAP35398 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC15.54■□□□□ 0.08
RORAP35398 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC15.54■□□□□ 0.08
RORAP35398 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.54■□□□□ 0.08
RORAP35398 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.54■□□□□ 0.08
RORAP35398 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RORAP35398 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC15.54■□□□□ 0.08
RORAP35398 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC15.54■□□□□ 0.08
RORAP35398 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RORAP35398 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RORAP35398 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RORAP35398 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RORAP35398 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RORAP35398 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
RORAP35398 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RORAP35398 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
RORAP35398 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RORAP35398 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RORAP35398 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
RORAP35398 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RORAP35398 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
RORAP35398 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
RORAP35398 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RORAP35398 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.54■□□□□ 0.08
RORAP35398 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
RORAP35398 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
RORAP35398 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RORAP35398 GRAMD4P3-201ENST00000621665 1669 ntBASIC15.54■□□□□ 0.08
RORAP35398 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RORAP35398 AL162727.3-201ENST00000635661 2787 ntBASIC15.53■□□□□ 0.08
RORAP35398 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.53■□□□□ 0.08
RORAP35398 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.53■□□□□ 0.08
RORAP35398 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RORAP35398 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
RORAP35398 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
RORAP35398 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
RORAP35398 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.53■□□□□ 0.08
RORAP35398 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms