Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.92■□□□□ 0.3
HOXA9P31269 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
HOXA9P31269 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.92■□□□□ 0.3
HOXA9P31269 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HOXA9P31269 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HOXA9P31269 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HOXA9P31269 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
HOXA9P31269 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HOXA9P31269 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.91■□□□□ 0.3
HOXA9P31269 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HOXA9P31269 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HOXA9P31269 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
HOXA9P31269 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
HOXA9P31269 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
HOXA9P31269 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HOXA9P31269 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HOXA9P31269 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC16.91■□□□□ 0.3
HOXA9P31269 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.91■□□□□ 0.3
HOXA9P31269 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.91■□□□□ 0.3
HOXA9P31269 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC16.91■□□□□ 0.3
HOXA9P31269 FUZ-207ENST00000526575 482 ntTSL 4 BASIC16.91■□□□□ 0.3
HOXA9P31269 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.91■□□□□ 0.3
HOXA9P31269 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC16.91■□□□□ 0.3
HOXA9P31269 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.91■□□□□ 0.3
HOXA9P31269 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.91■□□□□ 0.3
HOXA9P31269 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HOXA9P31269 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.91■□□□□ 0.3
HOXA9P31269 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HOXA9P31269 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HOXA9P31269 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HOXA9P31269 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HOXA9P31269 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HOXA9P31269 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.91■□□□□ 0.3
HOXA9P31269 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
HOXA9P31269 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HOXA9P31269 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HOXA9P31269 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.91■□□□□ 0.3
HOXA9P31269 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.91■□□□□ 0.3
HOXA9P31269 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC16.91■□□□□ 0.3
HOXA9P31269 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
HOXA9P31269 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HOXA9P31269 AL136982.4-201ENST00000437689 1740 ntBASIC16.9■□□□□ 0.3
HOXA9P31269 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HOXA9P31269 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.9■□□□□ 0.3
HOXA9P31269 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
HOXA9P31269 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HOXA9P31269 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HOXA9P31269 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HOXA9P31269 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HOXA9P31269 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
HOXA9P31269 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HOXA9P31269 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
HOXA9P31269 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
HOXA9P31269 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC16.9■□□□□ 0.3
HOXA9P31269 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HOXA9P31269 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC16.9■□□□□ 0.3
HOXA9P31269 MXI1-205ENST00000393134 889 ntTSL 2 BASIC16.9■□□□□ 0.3
HOXA9P31269 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HOXA9P31269 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HOXA9P31269 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
HOXA9P31269 TTTY23B-201ENST00000442790 549 ntBASIC16.9■□□□□ 0.3
HOXA9P31269 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HOXA9P31269 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC16.9■□□□□ 0.3
HOXA9P31269 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.9■□□□□ 0.3
HOXA9P31269 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.9■□□□□ 0.3
HOXA9P31269 KRT17P8-201ENST00000540749 863 ntBASIC16.9■□□□□ 0.3
HOXA9P31269 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC16.9■□□□□ 0.3
HOXA9P31269 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
HOXA9P31269 RARRES2P5-201ENST00000564013 466 ntBASIC16.9■□□□□ 0.3
HOXA9P31269 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.9■□□□□ 0.3
HOXA9P31269 CTBP2P3-201ENST00000585629 1255 ntBASIC16.9■□□□□ 0.3
HOXA9P31269 MIR6805-201ENST00000615055 62 ntBASIC16.9■□□□□ 0.3
HOXA9P31269 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HOXA9P31269 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.9■□□□□ 0.3
HOXA9P31269 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HOXA9P31269 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
HOXA9P31269 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HOXA9P31269 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
HOXA9P31269 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.9■□□□□ 0.3
HOXA9P31269 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.9■□□□□ 0.3
HOXA9P31269 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
HOXA9P31269 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
HOXA9P31269 AC124067.4-201ENST00000519691 2379 ntBASIC16.89■□□□□ 0.3
HOXA9P31269 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.3
HOXA9P31269 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HOXA9P31269 Z97205.2-201ENST00000564697 1639 ntBASIC16.89■□□□□ 0.29
HOXA9P31269 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HOXA9P31269 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HOXA9P31269 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
HOXA9P31269 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
HOXA9P31269 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HOXA9P31269 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
HOXA9P31269 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
HOXA9P31269 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HOXA9P31269 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HOXA9P31269 EEF1DP4-201ENST00000446006 880 ntBASIC16.89■□□□□ 0.29
HOXA9P31269 AC245100.5-201ENST00000452108 331 ntBASIC16.89■□□□□ 0.29
HOXA9P31269 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HOXA9P31269 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC16.89■□□□□ 0.29
HOXA9P31269 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms