Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
EPHA3P29320 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
EPHA3P29320 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
EPHA3P29320 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.98■□□□□ 0.15
EPHA3P29320 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
EPHA3P29320 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.98■□□□□ 0.15
EPHA3P29320 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
EPHA3P29320 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
EPHA3P29320 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
EPHA3P29320 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
EPHA3P29320 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
EPHA3P29320 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
EPHA3P29320 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
EPHA3P29320 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.98■□□□□ 0.15
EPHA3P29320 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
EPHA3P29320 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
EPHA3P29320 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
EPHA3P29320 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
EPHA3P29320 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
EPHA3P29320 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
EPHA3P29320 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC15.98■□□□□ 0.15
EPHA3P29320 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.98■□□□□ 0.15
EPHA3P29320 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.98■□□□□ 0.15
EPHA3P29320 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.98■□□□□ 0.15
EPHA3P29320 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.98■□□□□ 0.15
EPHA3P29320 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.98■□□□□ 0.15
EPHA3P29320 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.98■□□□□ 0.15
EPHA3P29320 MTDHP3-201ENST00000594186 672 ntBASIC15.98■□□□□ 0.15
EPHA3P29320 AC069148.1-201ENST00000608741 768 ntBASIC15.98■□□□□ 0.15
EPHA3P29320 AL732292.2-201ENST00000609649 430 ntBASIC15.98■□□□□ 0.15
EPHA3P29320 AC020765.3-201ENST00000613051 740 ntBASIC15.98■□□□□ 0.15
EPHA3P29320 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.98■□□□□ 0.15
EPHA3P29320 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
EPHA3P29320 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC15.98■□□□□ 0.15
EPHA3P29320 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.98■□□□□ 0.15
EPHA3P29320 AP000550.4-202ENST00000639755 178 ntBASIC15.98■□□□□ 0.15
EPHA3P29320 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
EPHA3P29320 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
EPHA3P29320 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
EPHA3P29320 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.98■□□□□ 0.15
EPHA3P29320 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
EPHA3P29320 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
EPHA3P29320 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
EPHA3P29320 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.98■□□□□ 0.15
EPHA3P29320 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
EPHA3P29320 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
EPHA3P29320 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
EPHA3P29320 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
EPHA3P29320 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC15.97■□□□□ 0.15
EPHA3P29320 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
EPHA3P29320 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.97■□□□□ 0.15
EPHA3P29320 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
EPHA3P29320 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.97■□□□□ 0.15
EPHA3P29320 AC005622.1-201ENST00000636801 1703 ntBASIC15.97■□□□□ 0.15
EPHA3P29320 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
EPHA3P29320 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
EPHA3P29320 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.97■□□□□ 0.15
EPHA3P29320 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
EPHA3P29320 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC15.97■□□□□ 0.15
EPHA3P29320 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.97■□□□□ 0.15
EPHA3P29320 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC15.97■□□□□ 0.15
EPHA3P29320 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
EPHA3P29320 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC15.97■□□□□ 0.15
EPHA3P29320 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.97■□□□□ 0.15
EPHA3P29320 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.97■□□□□ 0.15
EPHA3P29320 AP001350.2-201ENST00000625104 1094 ntBASIC15.97■□□□□ 0.15
EPHA3P29320 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.97■□□□□ 0.15
EPHA3P29320 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
EPHA3P29320 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
EPHA3P29320 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
EPHA3P29320 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
EPHA3P29320 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
EPHA3P29320 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
EPHA3P29320 AL592424.1-201ENST00000563624 1536 ntBASIC15.97■□□□□ 0.15
EPHA3P29320 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
EPHA3P29320 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.97■□□□□ 0.15
EPHA3P29320 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
EPHA3P29320 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
EPHA3P29320 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
EPHA3P29320 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
EPHA3P29320 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
EPHA3P29320 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
EPHA3P29320 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
EPHA3P29320 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
EPHA3P29320 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
EPHA3P29320 AC006504.4-201ENST00000592118 1568 ntBASIC15.96■□□□□ 0.15
EPHA3P29320 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
EPHA3P29320 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
EPHA3P29320 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
EPHA3P29320 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
EPHA3P29320 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
EPHA3P29320 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
EPHA3P29320 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
EPHA3P29320 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
EPHA3P29320 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
EPHA3P29320 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
EPHA3P29320 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.96■□□□□ 0.15
EPHA3P29320 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC15.96■□□□□ 0.15
EPHA3P29320 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
EPHA3P29320 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms