Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
CD53P19397 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CD53P19397 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD53P19397 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CD53P19397 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD53P19397 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CD53P19397 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD53P19397 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD53P19397 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD53P19397 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD53P19397 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD53P19397 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
CD53P19397 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CD53P19397 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
CD53P19397 AC126177.1-201ENST00000547829 2218 ntBASIC14.93□□□□□ -0.02
CD53P19397 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD53P19397 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD53P19397 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
CD53P19397 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14.93□□□□□ -0.02
CD53P19397 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD53P19397 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.93□□□□□ -0.02
CD53P19397 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD53P19397 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD53P19397 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.93□□□□□ -0.02
CD53P19397 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CD53P19397 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CD53P19397 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD53P19397 MIR770-201ENST00000390219 98 ntBASIC14.93□□□□□ -0.02
CD53P19397 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14.93□□□□□ -0.02
CD53P19397 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.93□□□□□ -0.02
CD53P19397 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC14.93□□□□□ -0.02
CD53P19397 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14.93□□□□□ -0.02
CD53P19397 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
CD53P19397 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.93□□□□□ -0.02
CD53P19397 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CD53P19397 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD53P19397 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
CD53P19397 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.93□□□□□ -0.02
CD53P19397 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
CD53P19397 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.93□□□□□ -0.02
CD53P19397 AL603832.2-201ENST00000566195 2125 ntBASIC14.93□□□□□ -0.02
CD53P19397 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD53P19397 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.93□□□□□ -0.02
CD53P19397 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC14.93□□□□□ -0.02
CD53P19397 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD53P19397 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CD53P19397 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC14.93□□□□□ -0.02
CD53P19397 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD53P19397 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD53P19397 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CD53P19397 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD53P19397 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD53P19397 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CD53P19397 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CD53P19397 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD53P19397 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD53P19397 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.92□□□□□ -0.02
CD53P19397 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
CD53P19397 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CD53P19397 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CD53P19397 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.92□□□□□ -0.02
CD53P19397 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.92□□□□□ -0.02
CD53P19397 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
CD53P19397 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.92□□□□□ -0.02
CD53P19397 AC148477.5-201ENST00000625164 1645 ntBASIC14.92□□□□□ -0.02
CD53P19397 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.92□□□□□ -0.02
CD53P19397 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD53P19397 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.92□□□□□ -0.02
CD53P19397 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
CD53P19397 AC007326.2-201ENST00000624224 7579 ntBASIC14.92□□□□□ -0.02
CD53P19397 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
CD53P19397 AC132938.5-201ENST00000624980 1813 ntBASIC14.92□□□□□ -0.02
CD53P19397 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD53P19397 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CD53P19397 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD53P19397 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.92□□□□□ -0.02
CD53P19397 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD53P19397 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CD53P19397 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD53P19397 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
CD53P19397 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD53P19397 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD53P19397 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CD53P19397 IGLL3P-201ENST00000412472 434 ntBASIC14.92□□□□□ -0.02
CD53P19397 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.92□□□□□ -0.02
CD53P19397 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
CD53P19397 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.92□□□□□ -0.02
CD53P19397 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.92□□□□□ -0.02
CD53P19397 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.92□□□□□ -0.02
CD53P19397 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.92□□□□□ -0.02
CD53P19397 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CD53P19397 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC14.92□□□□□ -0.02
CD53P19397 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CD53P19397 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.92□□□□□ -0.02
CD53P19397 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD53P19397 AC132872.4-202ENST00000622924 2756 ntBASIC14.92□□□□□ -0.02
CD53P19397 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD53P19397 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD53P19397 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC14.92□□□□□ -0.02
CD53P19397 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms