Protein–RNA interactions for Protein: P16298

PPP3CB, Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CBP16298 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PPP3CBP16298 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
PPP3CBP16298 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PPP3CBP16298 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.76□□□□□ -0.05
PPP3CBP16298 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC14.76□□□□□ -0.05
PPP3CBP16298 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
PPP3CBP16298 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PPP3CBP16298 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
PPP3CBP16298 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PPP3CBP16298 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PPP3CBP16298 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PPP3CBP16298 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PPP3CBP16298 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PPP3CBP16298 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
PPP3CBP16298 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PPP3CBP16298 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
PPP3CBP16298 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PPP3CBP16298 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
PPP3CBP16298 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
PPP3CBP16298 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
PPP3CBP16298 AC092919.2-201ENST00000623631 1645 ntBASIC14.75□□□□□ -0.05
PPP3CBP16298 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
PPP3CBP16298 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PPP3CBP16298 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC14.75□□□□□ -0.05
PPP3CBP16298 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
PPP3CBP16298 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PPP3CBP16298 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PPP3CBP16298 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PPP3CBP16298 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PPP3CBP16298 AL355306.1-201ENST00000415580 579 ntBASIC14.75□□□□□ -0.05
PPP3CBP16298 TSEN15P1-201ENST00000423257 515 ntBASIC14.75□□□□□ -0.05
PPP3CBP16298 SPDYE11-202ENST00000450699 704 ntBASIC14.75□□□□□ -0.05
PPP3CBP16298 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.75□□□□□ -0.05
PPP3CBP16298 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.75□□□□□ -0.05
PPP3CBP16298 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.75□□□□□ -0.05
PPP3CBP16298 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
PPP3CBP16298 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
PPP3CBP16298 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.75□□□□□ -0.05
PPP3CBP16298 SPDYE9P-201ENST00000570642 692 ntBASIC14.75□□□□□ -0.05
PPP3CBP16298 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.75□□□□□ -0.05
PPP3CBP16298 AL355385.1-201ENST00000606123 409 ntBASIC14.75□□□□□ -0.05
PPP3CBP16298 SPDYE10P-202ENST00000612005 668 ntBASIC14.75□□□□□ -0.05
PPP3CBP16298 SPDYE8P-202ENST00000612377 668 ntBASIC14.75□□□□□ -0.05
PPP3CBP16298 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.75□□□□□ -0.05
PPP3CBP16298 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
PPP3CBP16298 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PPP3CBP16298 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC14.75□□□□□ -0.05
PPP3CBP16298 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
PPP3CBP16298 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
PPP3CBP16298 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
PPP3CBP16298 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC14.75□□□□□ -0.05
PPP3CBP16298 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.75□□□□□ -0.05
PPP3CBP16298 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
PPP3CBP16298 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
PPP3CBP16298 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PPP3CBP16298 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PPP3CBP16298 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PPP3CBP16298 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
PPP3CBP16298 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PPP3CBP16298 AC093525.9-201ENST00000624961 1746 ntBASIC14.75□□□□□ -0.05
PPP3CBP16298 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.74□□□□□ -0.05
PPP3CBP16298 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
PPP3CBP16298 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.74□□□□□ -0.05
PPP3CBP16298 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PPP3CBP16298 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC14.74□□□□□ -0.05
PPP3CBP16298 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PPP3CBP16298 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PPP3CBP16298 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC14.74□□□□□ -0.05
PPP3CBP16298 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
PPP3CBP16298 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PPP3CBP16298 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PPP3CBP16298 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC14.74□□□□□ -0.05
PPP3CBP16298 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PPP3CBP16298 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.74□□□□□ -0.05
PPP3CBP16298 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PPP3CBP16298 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
PPP3CBP16298 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PPP3CBP16298 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PPP3CBP16298 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
PPP3CBP16298 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PPP3CBP16298 AC004461.1-201ENST00000412461 403 ntBASIC14.74□□□□□ -0.05
PPP3CBP16298 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.74□□□□□ -0.05
PPP3CBP16298 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.74□□□□□ -0.05
PPP3CBP16298 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
PPP3CBP16298 AC109635.5-201ENST00000533593 962 ntBASIC14.74□□□□□ -0.05
PPP3CBP16298 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.74□□□□□ -0.05
PPP3CBP16298 AC025678.2-201ENST00000562061 970 ntBASIC14.74□□□□□ -0.05
PPP3CBP16298 RARRES2P8-201ENST00000566335 367 ntBASIC14.74□□□□□ -0.05
PPP3CBP16298 AC022145.2-201ENST00000598203 171 ntBASIC14.74□□□□□ -0.05
PPP3CBP16298 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.74□□□□□ -0.05
PPP3CBP16298 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.74□□□□□ -0.05
PPP3CBP16298 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.74□□□□□ -0.05
PPP3CBP16298 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PPP3CBP16298 AC024909.3-201ENST00000611513 2257 ntBASIC14.74□□□□□ -0.05
PPP3CBP16298 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.74□□□□□ -0.05
PPP3CBP16298 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
PPP3CBP16298 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PPP3CBP16298 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
PPP3CBP16298 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
PPP3CBP16298 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms