Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC12.8□□□□□ -0.36
CD28P10747 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC12.8□□□□□ -0.36
CD28P10747 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CD28P10747 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CD28P10747 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CD28P10747 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CD28P10747 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CD28P10747 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CD28P10747 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CD28P10747 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC12.8□□□□□ -0.36
CD28P10747 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
CD28P10747 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CD28P10747 MRPS18AP1-201ENST00000414458 589 ntBASIC12.8□□□□□ -0.36
CD28P10747 TSSK5P-201ENST00000423978 907 ntBASIC12.8□□□□□ -0.36
CD28P10747 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
CD28P10747 GSAP-205ENST00000430584 600 ntTSL 5 BASIC12.8□□□□□ -0.36
CD28P10747 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC12.8□□□□□ -0.36
CD28P10747 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC12.8□□□□□ -0.36
CD28P10747 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC12.8□□□□□ -0.36
CD28P10747 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CD28P10747 AC098859.1-201ENST00000502915 1238 ntBASIC12.8□□□□□ -0.36
CD28P10747 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC12.8□□□□□ -0.36
CD28P10747 AL035252.4-201ENST00000624174 288 ntBASIC12.8□□□□□ -0.36
CD28P10747 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CD28P10747 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
CD28P10747 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CD28P10747 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC12.8□□□□□ -0.36
CD28P10747 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CD28P10747 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC12.8□□□□□ -0.36
CD28P10747 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
CD28P10747 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CD28P10747 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CD28P10747 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CD28P10747 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC12.8□□□□□ -0.36
CD28P10747 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC12.8□□□□□ -0.36
CD28P10747 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC12.8□□□□□ -0.36
CD28P10747 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CD28P10747 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CD28P10747 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CD28P10747 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC12.8□□□□□ -0.36
CD28P10747 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC12.8□□□□□ -0.36
CD28P10747 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CD28P10747 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CD28P10747 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC12.79□□□□□ -0.36
CD28P10747 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
CD28P10747 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CD28P10747 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CD28P10747 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC12.79□□□□□ -0.36
CD28P10747 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CD28P10747 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
CD28P10747 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC12.79□□□□□ -0.36
CD28P10747 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CD28P10747 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC12.79□□□□□ -0.36
CD28P10747 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
CD28P10747 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC12.79□□□□□ -0.36
CD28P10747 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CD28P10747 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC12.79□□□□□ -0.36
CD28P10747 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
CD28P10747 AC022144.1-201ENST00000602255 1580 ntBASIC12.79□□□□□ -0.36
CD28P10747 COPE-202ENST00000349893 948 ntTSL 2 BASIC12.79□□□□□ -0.36
CD28P10747 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
CD28P10747 FAM220BP-201ENST00000377689 816 ntBASIC12.79□□□□□ -0.36
CD28P10747 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CD28P10747 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CD28P10747 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC12.79□□□□□ -0.36
CD28P10747 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC12.79□□□□□ -0.36
CD28P10747 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CD28P10747 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC12.79□□□□□ -0.36
CD28P10747 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC12.79□□□□□ -0.36
CD28P10747 MPI-209ENST00000564003 1195 ntTSL 2 BASIC12.79□□□□□ -0.36
CD28P10747 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC12.79□□□□□ -0.36
CD28P10747 COX11-202ENST00000571584 1108 ntTSL 2 BASIC12.79□□□□□ -0.36
CD28P10747 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC12.79□□□□□ -0.36
CD28P10747 AL589739.1-201ENST00000607720 493 ntBASIC12.79□□□□□ -0.36
CD28P10747 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CD28P10747 GOLGA2P9-201ENST00000596977 1937 ntBASIC12.79□□□□□ -0.36
CD28P10747 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CD28P10747 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CD28P10747 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CD28P10747 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
CD28P10747 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CD28P10747 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CD28P10747 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CD28P10747 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CD28P10747 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CD28P10747 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC12.79□□□□□ -0.36
CD28P10747 AL035456.1-201ENST00000456064 1369 ntBASIC12.79□□□□□ -0.36
CD28P10747 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CD28P10747 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC12.79□□□□□ -0.36
CD28P10747 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
CD28P10747 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
CD28P10747 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CD28P10747 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC12.79□□□□□ -0.36
CD28P10747 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
CD28P10747 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
CD28P10747 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC12.78□□□□□ -0.36
CD28P10747 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
CD28P10747 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CD28P10747 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
CD28P10747 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms