Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
CCNYL3P0C7X3 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
CCNYL3P0C7X3 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCNYL3P0C7X3 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCNYL3P0C7X3 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
CCNYL3P0C7X3 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
CCNYL3P0C7X3 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.87■□□□□ 0.13
CCNYL3P0C7X3 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CCNYL3P0C7X3 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.86■□□□□ 0.13
CCNYL3P0C7X3 AC103702.1-201ENST00000548801 2630 ntBASIC15.86■□□□□ 0.13
CCNYL3P0C7X3 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.86■□□□□ 0.13
CCNYL3P0C7X3 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.86■□□□□ 0.13
CCNYL3P0C7X3 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCNYL3P0C7X3 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCNYL3P0C7X3 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CCNYL3P0C7X3 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.86■□□□□ 0.13
CCNYL3P0C7X3 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCNYL3P0C7X3 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCNYL3P0C7X3 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.86■□□□□ 0.13
CCNYL3P0C7X3 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.86■□□□□ 0.13
CCNYL3P0C7X3 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCNYL3P0C7X3 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC15.86■□□□□ 0.13
CCNYL3P0C7X3 FAM58DP-201ENST00000428076 619 ntBASIC15.86■□□□□ 0.13
CCNYL3P0C7X3 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.86■□□□□ 0.13
CCNYL3P0C7X3 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.86■□□□□ 0.13
CCNYL3P0C7X3 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.86■□□□□ 0.13
CCNYL3P0C7X3 BCRP1-201ENST00000444246 691 ntBASIC15.86■□□□□ 0.13
CCNYL3P0C7X3 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC15.86■□□□□ 0.13
CCNYL3P0C7X3 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.86■□□□□ 0.13
CCNYL3P0C7X3 AC093214.1-201ENST00000511688 1107 ntBASIC15.86■□□□□ 0.13
CCNYL3P0C7X3 AC069262.1-201ENST00000539058 672 ntBASIC15.86■□□□□ 0.13
CCNYL3P0C7X3 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CCNYL3P0C7X3 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC15.86■□□□□ 0.13
CCNYL3P0C7X3 AL031055.1-201ENST00000606362 631 ntBASIC15.86■□□□□ 0.13
CCNYL3P0C7X3 AL355338.1-201ENST00000612598 913 ntTSL 2 BASIC15.86■□□□□ 0.13
CCNYL3P0C7X3 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.86■□□□□ 0.13
CCNYL3P0C7X3 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
CCNYL3P0C7X3 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCNYL3P0C7X3 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.86■□□□□ 0.13
CCNYL3P0C7X3 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCNYL3P0C7X3 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCNYL3P0C7X3 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CCNYL3P0C7X3 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.86■□□□□ 0.13
CCNYL3P0C7X3 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CCNYL3P0C7X3 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCNYL3P0C7X3 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCNYL3P0C7X3 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCNYL3P0C7X3 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CCNYL3P0C7X3 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CCNYL3P0C7X3 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCNYL3P0C7X3 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCNYL3P0C7X3 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCNYL3P0C7X3 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCNYL3P0C7X3 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CCNYL3P0C7X3 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CCNYL3P0C7X3 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
CCNYL3P0C7X3 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.85■□□□□ 0.13
CCNYL3P0C7X3 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CCNYL3P0C7X3 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CCNYL3P0C7X3 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CCNYL3P0C7X3 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CCNYL3P0C7X3 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CCNYL3P0C7X3 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCNYL3P0C7X3 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCNYL3P0C7X3 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CCNYL3P0C7X3 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCNYL3P0C7X3 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CCNYL3P0C7X3 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.85■□□□□ 0.13
CCNYL3P0C7X3 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CCNYL3P0C7X3 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCNYL3P0C7X3 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCNYL3P0C7X3 RNU1-129P-201ENST00000384064 167 ntBASIC15.85■□□□□ 0.13
CCNYL3P0C7X3 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.85■□□□□ 0.13
CCNYL3P0C7X3 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC15.85■□□□□ 0.13
CCNYL3P0C7X3 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
CCNYL3P0C7X3 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC15.85■□□□□ 0.13
CCNYL3P0C7X3 DUX4L27-201ENST00000554796 1261 ntBASIC15.85■□□□□ 0.13
CCNYL3P0C7X3 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC15.85■□□□□ 0.13
CCNYL3P0C7X3 MIR3909-201ENST00000579518 119 ntBASIC15.85■□□□□ 0.13
CCNYL3P0C7X3 U1.21-201ENST00000580816 167 ntBASIC15.85■□□□□ 0.13
CCNYL3P0C7X3 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CCNYL3P0C7X3 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCNYL3P0C7X3 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCNYL3P0C7X3 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.85■□□□□ 0.13
CCNYL3P0C7X3 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.85■□□□□ 0.13
CCNYL3P0C7X3 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CCNYL3P0C7X3 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC15.85■□□□□ 0.13
CCNYL3P0C7X3 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.85■□□□□ 0.13
CCNYL3P0C7X3 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCNYL3P0C7X3 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.85■□□□□ 0.13
CCNYL3P0C7X3 AC131009.4-201ENST00000624048 1740 ntBASIC15.85■□□□□ 0.13
CCNYL3P0C7X3 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCNYL3P0C7X3 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CCNYL3P0C7X3 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCNYL3P0C7X3 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCNYL3P0C7X3 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.84■□□□□ 0.13
CCNYL3P0C7X3 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
CCNYL3P0C7X3 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CCNYL3P0C7X3 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCNYL3P0C7X3 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms