Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
HOXC6P09630 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HOXC6P09630 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HOXC6P09630 Z97205.2-201ENST00000564697 1639 ntBASIC18.33■□□□□ 0.52
HOXC6P09630 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HOXC6P09630 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
HOXC6P09630 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HOXC6P09630 CYP4F24P-201ENST00000586049 1580 ntBASIC18.33■□□□□ 0.52
HOXC6P09630 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.33■□□□□ 0.52
HOXC6P09630 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HOXC6P09630 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
HOXC6P09630 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HOXC6P09630 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HOXC6P09630 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC18.33■□□□□ 0.52
HOXC6P09630 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HOXC6P09630 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC18.33■□□□□ 0.52
HOXC6P09630 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.33■□□□□ 0.52
HOXC6P09630 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
HOXC6P09630 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HOXC6P09630 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HOXC6P09630 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HOXC6P09630 AL136982.4-201ENST00000437689 1740 ntBASIC18.32■□□□□ 0.52
HOXC6P09630 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC18.32■□□□□ 0.52
HOXC6P09630 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HOXC6P09630 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
HOXC6P09630 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
HOXC6P09630 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
HOXC6P09630 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
HOXC6P09630 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HOXC6P09630 ANKRD19P-201ENST00000338192 862 ntBASIC18.32■□□□□ 0.52
HOXC6P09630 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
HOXC6P09630 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC18.32■□□□□ 0.52
HOXC6P09630 AC104596.2-201ENST00000512793 793 ntBASIC18.32■□□□□ 0.52
HOXC6P09630 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC18.32■□□□□ 0.52
HOXC6P09630 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC18.32■□□□□ 0.52
HOXC6P09630 BTNL10-201ENST00000595971 695 ntBASIC18.32■□□□□ 0.52
HOXC6P09630 AC010319.3-201ENST00000597028 470 ntBASIC18.32■□□□□ 0.52
HOXC6P09630 AL365330.1-201ENST00000607459 531 ntBASIC18.32■□□□□ 0.52
HOXC6P09630 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC18.32■□□□□ 0.52
HOXC6P09630 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HOXC6P09630 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC18.32■□□□□ 0.52
HOXC6P09630 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
HOXC6P09630 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HOXC6P09630 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.32■□□□□ 0.52
HOXC6P09630 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HOXC6P09630 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HOXC6P09630 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
HOXC6P09630 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
HOXC6P09630 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
HOXC6P09630 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HOXC6P09630 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HOXC6P09630 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
HOXC6P09630 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
HOXC6P09630 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HOXC6P09630 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HOXC6P09630 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC18.31■□□□□ 0.52
HOXC6P09630 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HOXC6P09630 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
HOXC6P09630 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HOXC6P09630 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HOXC6P09630 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.31■□□□□ 0.52
HOXC6P09630 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HOXC6P09630 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
HOXC6P09630 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HOXC6P09630 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC18.31■□□□□ 0.52
HOXC6P09630 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC18.31■□□□□ 0.52
HOXC6P09630 USP32P1-208ENST00000506594 1164 ntBASIC18.31■□□□□ 0.52
HOXC6P09630 NOP2-211ENST00000540228 668 ntTSL 2 BASIC18.31■□□□□ 0.52
HOXC6P09630 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
HOXC6P09630 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC18.31■□□□□ 0.52
HOXC6P09630 PAM16-204ENST00000571941 674 ntTSL 3 BASIC18.31■□□□□ 0.52
HOXC6P09630 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC18.31■□□□□ 0.52
HOXC6P09630 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC18.31■□□□□ 0.52
HOXC6P09630 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HOXC6P09630 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
HOXC6P09630 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HOXC6P09630 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
HOXC6P09630 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HOXC6P09630 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HOXC6P09630 CLK3P2-201ENST00000427566 1453 ntBASIC18.31■□□□□ 0.52
HOXC6P09630 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
HOXC6P09630 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HOXC6P09630 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HOXC6P09630 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
HOXC6P09630 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HOXC6P09630 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HOXC6P09630 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HOXC6P09630 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HOXC6P09630 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HOXC6P09630 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.3■□□□□ 0.52
HOXC6P09630 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.3■□□□□ 0.52
HOXC6P09630 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HOXC6P09630 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
HOXC6P09630 AC006538.1-201ENST00000567905 1585 ntBASIC18.3■□□□□ 0.52
HOXC6P09630 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.3■□□□□ 0.52
HOXC6P09630 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HOXC6P09630 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HOXC6P09630 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HOXC6P09630 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HOXC6P09630 AC080080.1-201ENST00000625121 2420 ntBASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms