Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TPM1P09493 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TPM1P09493 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TPM1P09493 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TPM1P09493 AC131009.4-201ENST00000624048 1740 ntBASIC18.13■□□□□ 0.49
TPM1P09493 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TPM1P09493 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
TPM1P09493 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TPM1P09493 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC18.13■□□□□ 0.49
TPM1P09493 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TPM1P09493 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
TPM1P09493 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.13■□□□□ 0.49
TPM1P09493 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
TPM1P09493 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.13■□□□□ 0.49
TPM1P09493 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TPM1P09493 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.13■□□□□ 0.49
TPM1P09493 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
TPM1P09493 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TPM1P09493 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TPM1P09493 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
TPM1P09493 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TPM1P09493 AP005117.1-201ENST00000584346 1413 ntBASIC18.13■□□□□ 0.49
TPM1P09493 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
TPM1P09493 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC18.13■□□□□ 0.49
TPM1P09493 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC18.13■□□□□ 0.49
TPM1P09493 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TPM1P09493 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC18.12■□□□□ 0.49
TPM1P09493 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC18.12■□□□□ 0.49
TPM1P09493 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
TPM1P09493 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TPM1P09493 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TPM1P09493 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
TPM1P09493 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
TPM1P09493 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.12■□□□□ 0.49
TPM1P09493 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.12■□□□□ 0.49
TPM1P09493 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.12■□□□□ 0.49
TPM1P09493 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC18.12■□□□□ 0.49
TPM1P09493 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.12■□□□□ 0.49
TPM1P09493 AL139424.1-201ENST00000607572 797 ntBASIC18.12■□□□□ 0.49
TPM1P09493 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.12■□□□□ 0.49
TPM1P09493 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TPM1P09493 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TPM1P09493 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
TPM1P09493 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TPM1P09493 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
TPM1P09493 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
TPM1P09493 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
TPM1P09493 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
TPM1P09493 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
TPM1P09493 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC18.12■□□□□ 0.49
TPM1P09493 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TPM1P09493 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TPM1P09493 REXO1L8P-201ENST00000604378 1897 ntBASIC18.12■□□□□ 0.49
TPM1P09493 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC18.11■□□□□ 0.49
TPM1P09493 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
TPM1P09493 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
TPM1P09493 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
TPM1P09493 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TPM1P09493 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
TPM1P09493 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.11■□□□□ 0.49
TPM1P09493 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TPM1P09493 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TPM1P09493 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TPM1P09493 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.11■□□□□ 0.49
TPM1P09493 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TPM1P09493 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TPM1P09493 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.11■□□□□ 0.49
TPM1P09493 PAWRP1-201ENST00000451083 565 ntBASIC18.11■□□□□ 0.49
TPM1P09493 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TPM1P09493 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.11■□□□□ 0.49
TPM1P09493 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.11■□□□□ 0.49
TPM1P09493 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.11■□□□□ 0.49
TPM1P09493 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
TPM1P09493 AC064862.7-201ENST00000604520 867 ntBASIC18.11■□□□□ 0.49
TPM1P09493 AL589182.2-201ENST00000619332 1049 ntBASIC18.11■□□□□ 0.49
TPM1P09493 AP001350.2-201ENST00000625104 1094 ntBASIC18.11■□□□□ 0.49
TPM1P09493 AF228730.7-201ENST00000641842 219 ntBASIC18.11■□□□□ 0.49
TPM1P09493 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
TPM1P09493 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TPM1P09493 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TPM1P09493 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
TPM1P09493 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TPM1P09493 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TPM1P09493 AP005117.1-202ENST00000581724 1908 ntBASIC18.11■□□□□ 0.49
TPM1P09493 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TPM1P09493 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TPM1P09493 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TPM1P09493 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TPM1P09493 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TPM1P09493 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TPM1P09493 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TPM1P09493 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TPM1P09493 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TPM1P09493 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC18.1■□□□□ 0.49
TPM1P09493 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TPM1P09493 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TPM1P09493 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC18.1■□□□□ 0.49
TPM1P09493 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC18.1■□□□□ 0.49
TPM1P09493 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.1■□□□□ 0.49
TPM1P09493 OR2I1P-210ENST00000642037 4691 ntBASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms