Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
COL5A2P05997 AL592424.1-201ENST00000563624 1536 ntBASIC21.14■□□□□ 0.97
COL5A2P05997 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
COL5A2P05997 AGER-206ENST00000375070 1463 ntTSL 5 BASIC21.14■□□□□ 0.97
COL5A2P05997 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
COL5A2P05997 GCK-202ENST00000345378 2421 ntTSL 2 BASIC21.14■□□□□ 0.97
COL5A2P05997 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
COL5A2P05997 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
COL5A2P05997 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
COL5A2P05997 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
COL5A2P05997 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
COL5A2P05997 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
COL5A2P05997 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC21.13■□□□□ 0.97
COL5A2P05997 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC21.13■□□□□ 0.97
COL5A2P05997 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
COL5A2P05997 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC21.13■□□□□ 0.97
COL5A2P05997 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
COL5A2P05997 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC21.13■□□□□ 0.97
COL5A2P05997 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
COL5A2P05997 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC21.13■□□□□ 0.97
COL5A2P05997 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
COL5A2P05997 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC21.13■□□□□ 0.97
COL5A2P05997 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC21.13■□□□□ 0.97
COL5A2P05997 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC21.13■□□□□ 0.97
COL5A2P05997 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC21.13■□□□□ 0.97
COL5A2P05997 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC21.13■□□□□ 0.97
COL5A2P05997 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
COL5A2P05997 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC21.13■□□□□ 0.97
COL5A2P05997 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
COL5A2P05997 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
COL5A2P05997 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC21.13■□□□□ 0.97
COL5A2P05997 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
COL5A2P05997 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
COL5A2P05997 MIR326-201ENST00000362220 95 ntBASIC21.13■□□□□ 0.97
COL5A2P05997 BRF1-202ENST00000379932 884 ntTSL 5 BASIC21.13■□□□□ 0.97
COL5A2P05997 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
COL5A2P05997 AC092506.1-202ENST00000401022 528 ntBASIC21.13■□□□□ 0.97
COL5A2P05997 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
COL5A2P05997 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC21.13■□□□□ 0.97
COL5A2P05997 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC21.13■□□□□ 0.97
COL5A2P05997 IGHJ2P-201ENST00000454480 60 ntBASIC21.13■□□□□ 0.97
COL5A2P05997 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
COL5A2P05997 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC21.13■□□□□ 0.97
COL5A2P05997 AL118558.3-201ENST00000607414 1079 ntBASIC21.13■□□□□ 0.97
COL5A2P05997 AC091271.1-201ENST00000611877 1162 ntBASIC21.13■□□□□ 0.97
COL5A2P05997 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC21.13■□□□□ 0.97
COL5A2P05997 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC21.13■□□□□ 0.97
COL5A2P05997 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
COL5A2P05997 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC21.12■□□□□ 0.97
COL5A2P05997 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
COL5A2P05997 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
COL5A2P05997 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
COL5A2P05997 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
COL5A2P05997 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
COL5A2P05997 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
COL5A2P05997 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
COL5A2P05997 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC21.12■□□□□ 0.97
COL5A2P05997 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC21.12■□□□□ 0.97
COL5A2P05997 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
COL5A2P05997 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
COL5A2P05997 AC136604.1-201ENST00000418535 575 ntBASIC21.12■□□□□ 0.97
COL5A2P05997 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC21.12■□□□□ 0.97
COL5A2P05997 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC21.12■□□□□ 0.97
COL5A2P05997 CALR4P-201ENST00000431943 946 ntBASIC21.12■□□□□ 0.97
COL5A2P05997 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC21.12■□□□□ 0.97
COL5A2P05997 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC21.12■□□□□ 0.97
COL5A2P05997 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC21.12■□□□□ 0.97
COL5A2P05997 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC21.12■□□□□ 0.97
COL5A2P05997 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC21.12■□□□□ 0.97
COL5A2P05997 AL021578.1-201ENST00000613646 709 ntBASIC21.12■□□□□ 0.97
COL5A2P05997 PRKN-211ENST00000615065 261 ntTSL 5 BASIC21.12■□□□□ 0.97
COL5A2P05997 LARP4-220ENST00000615080 856 ntTSL 5 BASIC21.12■□□□□ 0.97
COL5A2P05997 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC21.12■□□□□ 0.97
COL5A2P05997 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
COL5A2P05997 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC21.12■□□□□ 0.97
COL5A2P05997 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
COL5A2P05997 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
COL5A2P05997 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
COL5A2P05997 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
COL5A2P05997 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
COL5A2P05997 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL5A2P05997 AC009053.2-201ENST00000563701 2365 ntBASIC21.11■□□□□ 0.97
COL5A2P05997 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL5A2P05997 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL5A2P05997 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC21.11■□□□□ 0.97
COL5A2P05997 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC21.11■□□□□ 0.97
COL5A2P05997 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL5A2P05997 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL5A2P05997 ZBTB45P2-201ENST00000452245 1531 ntBASIC21.11■□□□□ 0.97
COL5A2P05997 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
COL5A2P05997 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
COL5A2P05997 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL5A2P05997 AC007969.1-201ENST00000433675 447 ntBASIC21.11■□□□□ 0.97
COL5A2P05997 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC21.11■□□□□ 0.97
COL5A2P05997 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC21.11■□□□□ 0.97
COL5A2P05997 AC005695.3-201ENST00000614522 232 ntBASIC21.11■□□□□ 0.97
COL5A2P05997 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL5A2P05997 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL5A2P05997 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL5A2P05997 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms