Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
HLA-DQB2P05538 AL513210.1-201ENST00000629608 234 ntBASIC16.59■□□□□ 0.25
HLA-DQB2P05538 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DQB2P05538 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DQB2P05538 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.59■□□□□ 0.25
HLA-DQB2P05538 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
HLA-DQB2P05538 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.59■□□□□ 0.25
HLA-DQB2P05538 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DQB2P05538 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.59■□□□□ 0.25
HLA-DQB2P05538 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
HLA-DQB2P05538 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
HLA-DQB2P05538 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HLA-DQB2P05538 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
HLA-DQB2P05538 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
HLA-DQB2P05538 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HLA-DQB2P05538 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.25
HLA-DQB2P05538 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
HLA-DQB2P05538 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.58■□□□□ 0.24
HLA-DQB2P05538 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
HLA-DQB2P05538 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HLA-DQB2P05538 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HLA-DQB2P05538 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HLA-DQB2P05538 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.58■□□□□ 0.24
HLA-DQB2P05538 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HLA-DQB2P05538 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.58■□□□□ 0.24
HLA-DQB2P05538 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.58■□□□□ 0.24
HLA-DQB2P05538 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.58■□□□□ 0.24
HLA-DQB2P05538 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
HLA-DQB2P05538 IGHV3-62-201ENST00000520057 340 ntBASIC16.58■□□□□ 0.24
HLA-DQB2P05538 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.58■□□□□ 0.24
HLA-DQB2P05538 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.58■□□□□ 0.24
HLA-DQB2P05538 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.58■□□□□ 0.24
HLA-DQB2P05538 SPTSSB-204ENST00000617024 1292 ntBASIC16.58■□□□□ 0.24
HLA-DQB2P05538 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HLA-DQB2P05538 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HLA-DQB2P05538 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HLA-DQB2P05538 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HLA-DQB2P05538 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
HLA-DQB2P05538 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
HLA-DQB2P05538 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HLA-DQB2P05538 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.58■□□□□ 0.24
HLA-DQB2P05538 AC024909.3-201ENST00000611513 2257 ntBASIC16.58■□□□□ 0.24
HLA-DQB2P05538 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HLA-DQB2P05538 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.58■□□□□ 0.24
HLA-DQB2P05538 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HLA-DQB2P05538 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HLA-DQB2P05538 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HLA-DQB2P05538 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.58■□□□□ 0.24
HLA-DQB2P05538 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HLA-DQB2P05538 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HLA-DQB2P05538 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
HLA-DQB2P05538 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HLA-DQB2P05538 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HLA-DQB2P05538 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HLA-DQB2P05538 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HLA-DQB2P05538 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.57■□□□□ 0.24
HLA-DQB2P05538 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HLA-DQB2P05538 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HLA-DQB2P05538 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HLA-DQB2P05538 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
HLA-DQB2P05538 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.57■□□□□ 0.24
HLA-DQB2P05538 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
HLA-DQB2P05538 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HLA-DQB2P05538 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
HLA-DQB2P05538 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
HLA-DQB2P05538 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
HLA-DQB2P05538 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.57■□□□□ 0.24
HLA-DQB2P05538 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HLA-DQB2P05538 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HLA-DQB2P05538 MIR346-201ENST00000362234 95 ntBASIC16.57■□□□□ 0.24
HLA-DQB2P05538 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
HLA-DQB2P05538 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
HLA-DQB2P05538 AC004461.1-201ENST00000412461 403 ntBASIC16.57■□□□□ 0.24
HLA-DQB2P05538 AC211486.1-202ENST00000416371 468 ntBASIC16.57■□□□□ 0.24
HLA-DQB2P05538 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.57■□□□□ 0.24
HLA-DQB2P05538 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.57■□□□□ 0.24
HLA-DQB2P05538 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HLA-DQB2P05538 AC098859.1-201ENST00000502915 1238 ntBASIC16.57■□□□□ 0.24
HLA-DQB2P05538 AC211476.1-201ENST00000503899 468 ntBASIC16.57■□□□□ 0.24
HLA-DQB2P05538 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HLA-DQB2P05538 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.57■□□□□ 0.24
HLA-DQB2P05538 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.57■□□□□ 0.24
HLA-DQB2P05538 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.57■□□□□ 0.24
HLA-DQB2P05538 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.57■□□□□ 0.24
HLA-DQB2P05538 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.57■□□□□ 0.24
HLA-DQB2P05538 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
HLA-DQB2P05538 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HLA-DQB2P05538 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HLA-DQB2P05538 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
HLA-DQB2P05538 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.57■□□□□ 0.24
HLA-DQB2P05538 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
HLA-DQB2P05538 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HLA-DQB2P05538 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HLA-DQB2P05538 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
HLA-DQB2P05538 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HLA-DQB2P05538 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.57■□□□□ 0.24
HLA-DQB2P05538 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HLA-DQB2P05538 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
HLA-DQB2P05538 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.57■□□□□ 0.24
HLA-DQB2P05538 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms