Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
APOC1P02654 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
APOC1P02654 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
APOC1P02654 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
APOC1P02654 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
APOC1P02654 SBF1P1-201ENST00000444527 5631 ntBASIC14.56□□□□□ -0.08
APOC1P02654 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
APOC1P02654 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.56□□□□□ -0.08
APOC1P02654 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
APOC1P02654 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.56□□□□□ -0.08
APOC1P02654 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.55□□□□□ -0.08
APOC1P02654 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
APOC1P02654 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
APOC1P02654 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
APOC1P02654 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
APOC1P02654 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
APOC1P02654 WT1-209ENST00000530998 2421 ntTSL 2 BASIC14.55□□□□□ -0.08
APOC1P02654 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.55□□□□□ -0.08
APOC1P02654 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.55□□□□□ -0.08
APOC1P02654 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.55□□□□□ -0.08
APOC1P02654 SNX33P1-201ENST00000592116 1762 ntBASIC14.55□□□□□ -0.08
APOC1P02654 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
APOC1P02654 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
APOC1P02654 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
APOC1P02654 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.55□□□□□ -0.08
APOC1P02654 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
APOC1P02654 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.55□□□□□ -0.08
APOC1P02654 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
APOC1P02654 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
APOC1P02654 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
APOC1P02654 AC004870.1-201ENST00000315132 882 ntBASIC14.55□□□□□ -0.08
APOC1P02654 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
APOC1P02654 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
APOC1P02654 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
APOC1P02654 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
APOC1P02654 MED22-202ENST00000371999 987 ntTSL 3 BASIC14.55□□□□□ -0.08
APOC1P02654 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
APOC1P02654 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
APOC1P02654 PMS2P1-201ENST00000431037 1228 ntBASIC14.55□□□□□ -0.08
APOC1P02654 AC018712.1-201ENST00000455767 687 ntBASIC14.55□□□□□ -0.08
APOC1P02654 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC14.55□□□□□ -0.08
APOC1P02654 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
APOC1P02654 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC14.55□□□□□ -0.08
APOC1P02654 RIN3-211ENST00000557762 517 ntTSL 3 BASIC14.55□□□□□ -0.08
APOC1P02654 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC14.55□□□□□ -0.08
APOC1P02654 AC012313.10-201ENST00000623509 926 ntBASIC14.55□□□□□ -0.08
APOC1P02654 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC14.55□□□□□ -0.08
APOC1P02654 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
APOC1P02654 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
APOC1P02654 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
APOC1P02654 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
APOC1P02654 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.55□□□□□ -0.08
APOC1P02654 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.55□□□□□ -0.08
APOC1P02654 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
APOC1P02654 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
APOC1P02654 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC14.55□□□□□ -0.08
APOC1P02654 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.55□□□□□ -0.08
APOC1P02654 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
APOC1P02654 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
APOC1P02654 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
APOC1P02654 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.55□□□□□ -0.08
APOC1P02654 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
APOC1P02654 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC14.55□□□□□ -0.08
APOC1P02654 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
APOC1P02654 AL512652.2-201ENST00000625156 1716 ntBASIC14.55□□□□□ -0.08
APOC1P02654 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
APOC1P02654 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
APOC1P02654 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
APOC1P02654 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
APOC1P02654 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
APOC1P02654 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
APOC1P02654 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
APOC1P02654 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
APOC1P02654 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.54□□□□□ -0.08
APOC1P02654 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.54□□□□□ -0.08
APOC1P02654 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
APOC1P02654 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.54□□□□□ -0.08
APOC1P02654 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
APOC1P02654 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
APOC1P02654 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
APOC1P02654 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
APOC1P02654 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
APOC1P02654 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
APOC1P02654 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
APOC1P02654 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
APOC1P02654 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
APOC1P02654 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.54□□□□□ -0.08
APOC1P02654 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
APOC1P02654 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
APOC1P02654 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC14.54□□□□□ -0.08
APOC1P02654 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC14.54□□□□□ -0.08
APOC1P02654 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
APOC1P02654 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC14.54□□□□□ -0.08
APOC1P02654 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
APOC1P02654 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.54□□□□□ -0.08
APOC1P02654 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC14.54□□□□□ -0.08
APOC1P02654 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.54□□□□□ -0.08
APOC1P02654 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
APOC1P02654 AL691432.3-201ENST00000621860 400 ntBASIC14.54□□□□□ -0.08
APOC1P02654 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms