Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DQA1P01909 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DQA1P01909 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
HLA-DQA1P01909 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC12.37□□□□□ -0.43
HLA-DQA1P01909 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC12.37□□□□□ -0.43
HLA-DQA1P01909 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC12.37□□□□□ -0.43
HLA-DQA1P01909 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
HLA-DQA1P01909 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC12.37□□□□□ -0.43
HLA-DQA1P01909 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DQA1P01909 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DQA1P01909 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DQA1P01909 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
HLA-DQA1P01909 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC12.37□□□□□ -0.43
HLA-DQA1P01909 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
HLA-DQA1P01909 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
HLA-DQA1P01909 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DQA1P01909 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DQA1P01909 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DQA1P01909 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DQA1P01909 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DQA1P01909 ADAMTS7P1-201ENST00000613213 4793 ntBASIC12.37□□□□□ -0.43
HLA-DQA1P01909 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC12.37□□□□□ -0.43
HLA-DQA1P01909 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC12.37□□□□□ -0.43
HLA-DQA1P01909 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DQA1P01909 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DQA1P01909 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
HLA-DQA1P01909 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
HLA-DQA1P01909 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
HLA-DQA1P01909 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DQA1P01909 AC009947.2-201ENST00000444014 672 ntBASIC12.37□□□□□ -0.43
HLA-DQA1P01909 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC12.37□□□□□ -0.43
HLA-DQA1P01909 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DQA1P01909 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC12.37□□□□□ -0.43
HLA-DQA1P01909 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC12.37□□□□□ -0.43
HLA-DQA1P01909 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC12.37□□□□□ -0.43
HLA-DQA1P01909 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC12.37□□□□□ -0.43
HLA-DQA1P01909 TK1-205ENST00000590862 642 ntTSL 3 BASIC12.37□□□□□ -0.43
HLA-DQA1P01909 AC013467.2-201ENST00000605472 835 ntBASIC12.37□□□□□ -0.43
HLA-DQA1P01909 AC024243.1-201ENST00000609234 778 ntBASIC12.37□□□□□ -0.43
HLA-DQA1P01909 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC12.37□□□□□ -0.43
HLA-DQA1P01909 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DQA1P01909 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DQA1P01909 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DQA1P01909 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC12.37□□□□□ -0.43
HLA-DQA1P01909 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
HLA-DQA1P01909 AC232323.1-201ENST00000540724 2099 ntBASIC12.37□□□□□ -0.43
HLA-DQA1P01909 REXO1L5P-201ENST00000622260 2098 ntBASIC12.37□□□□□ -0.43
HLA-DQA1P01909 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DQA1P01909 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC12.37□□□□□ -0.43
HLA-DQA1P01909 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DQA1P01909 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC12.37□□□□□ -0.43
HLA-DQA1P01909 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DQA1P01909 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC12.37□□□□□ -0.43
HLA-DQA1P01909 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DQA1P01909 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DQA1P01909 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
HLA-DQA1P01909 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DQA1P01909 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DQA1P01909 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DQA1P01909 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC12.37□□□□□ -0.43
HLA-DQA1P01909 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC12.37□□□□□ -0.43
HLA-DQA1P01909 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC12.37□□□□□ -0.43
HLA-DQA1P01909 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DQA1P01909 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC12.37□□□□□ -0.43
HLA-DQA1P01909 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DQA1P01909 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC12.37□□□□□ -0.43
HLA-DQA1P01909 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DQA1P01909 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DQA1P01909 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DQA1P01909 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HLA-DQA1P01909 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC12.36□□□□□ -0.43
HLA-DQA1P01909 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HLA-DQA1P01909 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
HLA-DQA1P01909 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
HLA-DQA1P01909 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HLA-DQA1P01909 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
HLA-DQA1P01909 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HLA-DQA1P01909 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC12.36□□□□□ -0.43
HLA-DQA1P01909 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
HLA-DQA1P01909 REXO1L8P-201ENST00000604378 1897 ntBASIC12.36□□□□□ -0.43
HLA-DQA1P01909 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC12.36□□□□□ -0.43
HLA-DQA1P01909 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
HLA-DQA1P01909 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
HLA-DQA1P01909 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HLA-DQA1P01909 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC12.36□□□□□ -0.43
HLA-DQA1P01909 AC010460.3-201ENST00000511359 1579 ntBASIC12.36□□□□□ -0.43
HLA-DQA1P01909 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
HLA-DQA1P01909 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HLA-DQA1P01909 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
HLA-DQA1P01909 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC12.36□□□□□ -0.43
HLA-DQA1P01909 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
HLA-DQA1P01909 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
HLA-DQA1P01909 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
HLA-DQA1P01909 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC12.36□□□□□ -0.43
HLA-DQA1P01909 SAPCD2P2-201ENST00000431719 1174 ntBASIC12.36□□□□□ -0.43
HLA-DQA1P01909 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HLA-DQA1P01909 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC12.36□□□□□ -0.43
HLA-DQA1P01909 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC12.36□□□□□ -0.43
HLA-DQA1P01909 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC12.36□□□□□ -0.43
HLA-DQA1P01909 FAM87A-204ENST00000613235 858 ntBASIC12.36□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms