Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 AC092337.1-201ENST00000568699 1129 ntBASIC17.98■□□□□ 0.47
CD4P01730 MIR6069-201ENST00000620069 79 ntBASIC17.98■□□□□ 0.47
CD4P01730 COX11-210ENST00000639671 696 ntBASIC17.98■□□□□ 0.47
CD4P01730 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
CD4P01730 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CD4P01730 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CD4P01730 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CD4P01730 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CD4P01730 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CD4P01730 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CD4P01730 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CD4P01730 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.98■□□□□ 0.47
CD4P01730 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.98■□□□□ 0.47
CD4P01730 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.98■□□□□ 0.47
CD4P01730 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC17.98■□□□□ 0.47
CD4P01730 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CD4P01730 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CD4P01730 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CD4P01730 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.97■□□□□ 0.47
CD4P01730 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CD4P01730 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CD4P01730 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CD4P01730 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CD4P01730 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CD4P01730 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CD4P01730 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CD4P01730 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CD4P01730 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CD4P01730 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC17.97■□□□□ 0.47
CD4P01730 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CD4P01730 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CD4P01730 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC17.97■□□□□ 0.47
CD4P01730 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC17.97■□□□□ 0.47
CD4P01730 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC17.97■□□□□ 0.47
CD4P01730 AC007389.4-201ENST00000454674 793 ntBASIC17.97■□□□□ 0.47
CD4P01730 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CD4P01730 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CD4P01730 NOP2-211ENST00000540228 668 ntTSL 2 BASIC17.97■□□□□ 0.47
CD4P01730 ORC6-206ENST00000568364 888 ntTSL 5 BASIC17.97■□□□□ 0.47
CD4P01730 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC17.97■□□□□ 0.47
CD4P01730 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
CD4P01730 WFDC1-204ENST00000613603 549 ntBASIC17.97■□□□□ 0.47
CD4P01730 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
CD4P01730 MIR6775-201ENST00000617557 69 ntBASIC17.97■□□□□ 0.47
CD4P01730 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC17.97■□□□□ 0.47
CD4P01730 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CD4P01730 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CD4P01730 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.97■□□□□ 0.47
CD4P01730 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC17.97■□□□□ 0.47
CD4P01730 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CD4P01730 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CD4P01730 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CD4P01730 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CD4P01730 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
CD4P01730 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CD4P01730 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CD4P01730 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CD4P01730 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CD4P01730 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.96■□□□□ 0.47
CD4P01730 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.96■□□□□ 0.47
CD4P01730 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CD4P01730 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CD4P01730 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CD4P01730 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
CD4P01730 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CD4P01730 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CD4P01730 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CD4P01730 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CD4P01730 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CD4P01730 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC17.96■□□□□ 0.47
CD4P01730 RPL28-204ENST00000431533 590 ntTSL 2 BASIC17.96■□□□□ 0.47
CD4P01730 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC17.96■□□□□ 0.47
CD4P01730 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC17.96■□□□□ 0.47
CD4P01730 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC17.96■□□□□ 0.47
CD4P01730 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC17.96■□□□□ 0.47
CD4P01730 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC17.96■□□□□ 0.47
CD4P01730 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC17.96■□□□□ 0.47
CD4P01730 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CD4P01730 SNX29P1-201ENST00000548357 1007 ntBASIC17.96■□□□□ 0.47
CD4P01730 RPL28-206ENST00000558752 671 ntTSL 3 BASIC17.96■□□□□ 0.47
CD4P01730 RRP7BP-205ENST00000566851 833 ntBASIC17.96■□□□□ 0.47
CD4P01730 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC17.96■□□□□ 0.47
CD4P01730 TMEM261P1-201ENST00000604899 340 ntBASIC17.96■□□□□ 0.47
CD4P01730 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CD4P01730 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
CD4P01730 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CD4P01730 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CD4P01730 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CD4P01730 AL645728.1-201ENST00000366221 2101 ntBASIC17.96■□□□□ 0.47
CD4P01730 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CD4P01730 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CD4P01730 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CD4P01730 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CD4P01730 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.96■□□□□ 0.47
CD4P01730 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CD4P01730 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CD4P01730 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CD4P01730 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CD4P01730 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.96■□□□□ 0.47
CD4P01730 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms