Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GGPS1O95749 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GGPS1O95749 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
GGPS1O95749 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC18.31■□□□□ 0.52
GGPS1O95749 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC18.31■□□□□ 0.52
GGPS1O95749 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
GGPS1O95749 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GGPS1O95749 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
GGPS1O95749 HLA-A-202ENST00000376806 1854 ntBASIC18.31■□□□□ 0.52
GGPS1O95749 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
GGPS1O95749 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
GGPS1O95749 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.31■□□□□ 0.52
GGPS1O95749 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GGPS1O95749 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
GGPS1O95749 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GGPS1O95749 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC18.31■□□□□ 0.52
GGPS1O95749 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC18.31■□□□□ 0.52
GGPS1O95749 SPTLC1P1-201ENST00000447199 261 ntBASIC18.31■□□□□ 0.52
GGPS1O95749 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC18.31■□□□□ 0.52
GGPS1O95749 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC18.31■□□□□ 0.52
GGPS1O95749 COQ9-214ENST00000567933 882 ntTSL 3 BASIC18.31■□□□□ 0.52
GGPS1O95749 AC004233.3-201ENST00000607794 1269 ntBASIC18.31■□□□□ 0.52
GGPS1O95749 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC18.31■□□□□ 0.52
GGPS1O95749 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC18.31■□□□□ 0.52
GGPS1O95749 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GGPS1O95749 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GGPS1O95749 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
GGPS1O95749 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
GGPS1O95749 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.31■□□□□ 0.52
GGPS1O95749 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
GGPS1O95749 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
GGPS1O95749 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GGPS1O95749 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GGPS1O95749 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
GGPS1O95749 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
GGPS1O95749 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
GGPS1O95749 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GGPS1O95749 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC18.31■□□□□ 0.52
GGPS1O95749 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
GGPS1O95749 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GGPS1O95749 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
GGPS1O95749 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC18.3■□□□□ 0.52
GGPS1O95749 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GGPS1O95749 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
GGPS1O95749 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GGPS1O95749 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GGPS1O95749 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
GGPS1O95749 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
GGPS1O95749 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
GGPS1O95749 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GGPS1O95749 LINC01144-201ENST00000626198 1710 ntBASIC18.3■□□□□ 0.52
GGPS1O95749 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GGPS1O95749 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GGPS1O95749 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
GGPS1O95749 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
GGPS1O95749 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GGPS1O95749 PIN1P1-201ENST00000412108 996 ntBASIC18.3■□□□□ 0.52
GGPS1O95749 GSAP-205ENST00000430584 600 ntTSL 5 BASIC18.3■□□□□ 0.52
GGPS1O95749 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC18.3■□□□□ 0.52
GGPS1O95749 RBM7-207ENST00000544582 692 ntTSL 3 BASIC18.3■□□□□ 0.52
GGPS1O95749 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
GGPS1O95749 PRR29-204ENST00000577953 565 ntTSL 4 BASIC18.3■□□□□ 0.52
GGPS1O95749 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
GGPS1O95749 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC18.3■□□□□ 0.52
GGPS1O95749 AC026979.3-201ENST00000607315 403 ntBASIC18.3■□□□□ 0.52
GGPS1O95749 AC012645.4-201ENST00000610691 1061 ntBASIC18.3■□□□□ 0.52
GGPS1O95749 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GGPS1O95749 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC18.3■□□□□ 0.52
GGPS1O95749 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC18.3■□□□□ 0.52
GGPS1O95749 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
GGPS1O95749 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC18.3■□□□□ 0.52
GGPS1O95749 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GGPS1O95749 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
GGPS1O95749 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC18.3■□□□□ 0.52
GGPS1O95749 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
GGPS1O95749 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
GGPS1O95749 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GGPS1O95749 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GGPS1O95749 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
GGPS1O95749 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.3■□□□□ 0.52
GGPS1O95749 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GGPS1O95749 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GGPS1O95749 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
GGPS1O95749 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
GGPS1O95749 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC18.3■□□□□ 0.52
GGPS1O95749 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC18.3■□□□□ 0.52
GGPS1O95749 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC18.3■□□□□ 0.52
GGPS1O95749 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GGPS1O95749 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
GGPS1O95749 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GGPS1O95749 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
GGPS1O95749 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GGPS1O95749 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC18.29■□□□□ 0.52
GGPS1O95749 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
GGPS1O95749 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GGPS1O95749 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GGPS1O95749 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
GGPS1O95749 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GGPS1O95749 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
GGPS1O95749 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms