Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLSTN1O94985 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLSTN1O94985 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLSTN1O94985 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLSTN1O94985 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CLSTN1O94985 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CLSTN1O94985 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CLSTN1O94985 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLSTN1O94985 AC006449.5-201ENST00000610658 2098 ntBASIC18.21■□□□□ 0.51
CLSTN1O94985 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLSTN1O94985 AC129492.6-201ENST00000611383 1305 ntBASIC18.21■□□□□ 0.51
CLSTN1O94985 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC18.21■□□□□ 0.5
CLSTN1O94985 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.5
CLSTN1O94985 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLSTN1O94985 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLSTN1O94985 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLSTN1O94985 TOP3BP1-201ENST00000420768 1380 ntBASIC18.2■□□□□ 0.5
CLSTN1O94985 HARS-204ENST00000438307 1789 ntTSL 2 BASIC18.2■□□□□ 0.5
CLSTN1O94985 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLSTN1O94985 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CLSTN1O94985 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLSTN1O94985 PCDHA1-201ENST00000378133 2726 ntBASIC18.2■□□□□ 0.5
CLSTN1O94985 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLSTN1O94985 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLSTN1O94985 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.2■□□□□ 0.5
CLSTN1O94985 PRSS29P-201ENST00000440800 595 ntBASIC18.2■□□□□ 0.5
CLSTN1O94985 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLSTN1O94985 POLD2P1-201ENST00000511220 997 ntBASIC18.2■□□□□ 0.5
CLSTN1O94985 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CLSTN1O94985 AP002490.2-201ENST00000524791 560 ntBASIC18.2■□□□□ 0.5
CLSTN1O94985 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CLSTN1O94985 AC145285.3-201ENST00000564603 959 ntBASIC18.2■□□□□ 0.5
CLSTN1O94985 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.2■□□□□ 0.5
CLSTN1O94985 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC18.2■□□□□ 0.5
CLSTN1O94985 AC027601.4-201ENST00000611259 610 ntBASIC18.2■□□□□ 0.5
CLSTN1O94985 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLSTN1O94985 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC18.2■□□□□ 0.5
CLSTN1O94985 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC18.2■□□□□ 0.5
CLSTN1O94985 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC18.2■□□□□ 0.5
CLSTN1O94985 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLSTN1O94985 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC18.2■□□□□ 0.5
CLSTN1O94985 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.2■□□□□ 0.5
CLSTN1O94985 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
CLSTN1O94985 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLSTN1O94985 RNF216P1-203ENST00000404404 2427 ntBASIC18.2■□□□□ 0.5
CLSTN1O94985 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC18.2■□□□□ 0.5
CLSTN1O94985 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLSTN1O94985 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CLSTN1O94985 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CLSTN1O94985 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLSTN1O94985 CYP51A1P2-201ENST00000419457 1499 ntBASIC18.2■□□□□ 0.5
CLSTN1O94985 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLSTN1O94985 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLSTN1O94985 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC18.19■□□□□ 0.5
CLSTN1O94985 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
CLSTN1O94985 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLSTN1O94985 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC18.19■□□□□ 0.5
CLSTN1O94985 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
CLSTN1O94985 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLSTN1O94985 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
CLSTN1O94985 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLSTN1O94985 MYO15B-237ENST00000642007 4893 ntBASIC18.19■□□□□ 0.5
CLSTN1O94985 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CLSTN1O94985 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLSTN1O94985 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLSTN1O94985 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
CLSTN1O94985 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
CLSTN1O94985 KRT18P3-201ENST00000451602 1288 ntBASIC18.19■□□□□ 0.5
CLSTN1O94985 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC18.19■□□□□ 0.5
CLSTN1O94985 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC18.19■□□□□ 0.5
CLSTN1O94985 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLSTN1O94985 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CLSTN1O94985 AC106730.1-201ENST00000566722 1090 ntBASIC18.19■□□□□ 0.5
CLSTN1O94985 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLSTN1O94985 AC010507.1-201ENST00000633895 436 ntBASIC18.19■□□□□ 0.5
CLSTN1O94985 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.19■□□□□ 0.5
CLSTN1O94985 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC18.19■□□□□ 0.5
CLSTN1O94985 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLSTN1O94985 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CLSTN1O94985 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CLSTN1O94985 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CLSTN1O94985 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLSTN1O94985 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CLSTN1O94985 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLSTN1O94985 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CLSTN1O94985 BCAR1-209ENST00000546196 1340 ntBASIC18.19■□□□□ 0.5
CLSTN1O94985 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CLSTN1O94985 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC18.19■□□□□ 0.5
CLSTN1O94985 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLSTN1O94985 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLSTN1O94985 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CLSTN1O94985 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLSTN1O94985 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC18.18■□□□□ 0.5
CLSTN1O94985 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLSTN1O94985 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLSTN1O94985 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC18.18■□□□□ 0.5
CLSTN1O94985 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLSTN1O94985 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC18.18■□□□□ 0.5
CLSTN1O94985 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC18.18■□□□□ 0.5
CLSTN1O94985 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms