Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDKL5O76039 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CDKL5O76039 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CDKL5O76039 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDKL5O76039 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDKL5O76039 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
CDKL5O76039 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDKL5O76039 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CDKL5O76039 BSG-215ENST00000618006 1329 ntTSL 2 BASIC19.03■□□□□ 0.64
CDKL5O76039 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CDKL5O76039 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDKL5O76039 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
CDKL5O76039 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDKL5O76039 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDKL5O76039 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDKL5O76039 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC19.03■□□□□ 0.64
CDKL5O76039 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CDKL5O76039 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDKL5O76039 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDKL5O76039 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDKL5O76039 RN7SL589P-201ENST00000481268 310 ntBASIC19.03■□□□□ 0.64
CDKL5O76039 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CDKL5O76039 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CDKL5O76039 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC19.03■□□□□ 0.64
CDKL5O76039 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
CDKL5O76039 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CDKL5O76039 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CDKL5O76039 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
CDKL5O76039 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDKL5O76039 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC19.03■□□□□ 0.64
CDKL5O76039 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC19.03■□□□□ 0.64
CDKL5O76039 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
CDKL5O76039 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC19.03■□□□□ 0.64
CDKL5O76039 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC19.03■□□□□ 0.64
CDKL5O76039 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDKL5O76039 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CDKL5O76039 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CDKL5O76039 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CDKL5O76039 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDKL5O76039 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDKL5O76039 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CDKL5O76039 NARF-206ENST00000457415 1668 ntTSL 5 BASIC19.02■□□□□ 0.64
CDKL5O76039 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CDKL5O76039 AC022188.1-201ENST00000620960 1664 ntBASIC19.02■□□□□ 0.64
CDKL5O76039 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDKL5O76039 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDKL5O76039 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDKL5O76039 AL589702.1-201ENST00000641229 1509 ntBASIC19.02■□□□□ 0.64
CDKL5O76039 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
CDKL5O76039 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDKL5O76039 PMP22-202ENST00000395936 816 ntTSL 3 BASIC19.02■□□□□ 0.64
CDKL5O76039 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC19.02■□□□□ 0.64
CDKL5O76039 AL671277.1-201ENST00000429656 993 ntBASIC19.02■□□□□ 0.64
CDKL5O76039 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CDKL5O76039 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC19.02■□□□□ 0.64
CDKL5O76039 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDKL5O76039 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC19.02■□□□□ 0.64
CDKL5O76039 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC19.02■□□□□ 0.64
CDKL5O76039 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC19.02■□□□□ 0.64
CDKL5O76039 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC19.02■□□□□ 0.64
CDKL5O76039 IGHV3OR16-6-201ENST00000568775 360 ntBASIC19.02■□□□□ 0.64
CDKL5O76039 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC19.02■□□□□ 0.64
CDKL5O76039 FHL2-212ENST00000607522 759 ntTSL 2 BASIC19.02■□□□□ 0.64
CDKL5O76039 AC092902.6-201ENST00000641783 218 ntBASIC19.02■□□□□ 0.64
CDKL5O76039 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
CDKL5O76039 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
CDKL5O76039 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC19.02■□□□□ 0.64
CDKL5O76039 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC19.02■□□□□ 0.64
CDKL5O76039 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CDKL5O76039 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDKL5O76039 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDKL5O76039 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CDKL5O76039 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CDKL5O76039 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC19.02■□□□□ 0.63
CDKL5O76039 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CDKL5O76039 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CDKL5O76039 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CDKL5O76039 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CDKL5O76039 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
CDKL5O76039 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
CDKL5O76039 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CDKL5O76039 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDKL5O76039 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CDKL5O76039 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CDKL5O76039 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDKL5O76039 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CDKL5O76039 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC19.01■□□□□ 0.63
CDKL5O76039 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CDKL5O76039 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC19.01■□□□□ 0.63
CDKL5O76039 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC19.01■□□□□ 0.63
CDKL5O76039 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDKL5O76039 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC19.01■□□□□ 0.63
CDKL5O76039 ACTG1P14-201ENST00000446382 1122 ntBASIC19.01■□□□□ 0.63
CDKL5O76039 AC245100.5-201ENST00000452108 331 ntBASIC19.01■□□□□ 0.63
CDKL5O76039 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC19.01■□□□□ 0.63
CDKL5O76039 AL135744.1-201ENST00000565098 629 ntBASIC19.01■□□□□ 0.63
CDKL5O76039 AC073389.1-201ENST00000595595 795 ntBASIC19.01■□□□□ 0.63
CDKL5O76039 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
CDKL5O76039 MTDHP5-201ENST00000598980 586 ntBASIC19.01■□□□□ 0.63
CDKL5O76039 CITED2-204ENST00000618718 901 ntTSL 2 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms