Protein–RNA interactions for Protein: O75439

PMPCB, Mitochondrial-processing peptidase subunit beta, humanhuman

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCBO75439 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PMPCBO75439 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
PMPCBO75439 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PMPCBO75439 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
PMPCBO75439 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PMPCBO75439 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
PMPCBO75439 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
PMPCBO75439 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PMPCBO75439 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.65■□□□□ 0.26
PMPCBO75439 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PMPCBO75439 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PMPCBO75439 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PMPCBO75439 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PMPCBO75439 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.65■□□□□ 0.26
PMPCBO75439 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PMPCBO75439 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.65■□□□□ 0.26
PMPCBO75439 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PMPCBO75439 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.65■□□□□ 0.26
PMPCBO75439 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PMPCBO75439 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.65■□□□□ 0.26
PMPCBO75439 MCCD1P2-201ENST00000423228 335 ntBASIC16.65■□□□□ 0.26
PMPCBO75439 AC004832.2-201ENST00000426397 482 ntBASIC16.65■□□□□ 0.26
PMPCBO75439 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PMPCBO75439 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
PMPCBO75439 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.65■□□□□ 0.26
PMPCBO75439 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.65■□□□□ 0.26
PMPCBO75439 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
PMPCBO75439 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PMPCBO75439 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
PMPCBO75439 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PMPCBO75439 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.65■□□□□ 0.26
PMPCBO75439 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.65■□□□□ 0.26
PMPCBO75439 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PMPCBO75439 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PMPCBO75439 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.65■□□□□ 0.26
PMPCBO75439 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PMPCBO75439 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
PMPCBO75439 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PMPCBO75439 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PMPCBO75439 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PMPCBO75439 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PMPCBO75439 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.65■□□□□ 0.26
PMPCBO75439 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.65■□□□□ 0.26
PMPCBO75439 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
PMPCBO75439 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.64■□□□□ 0.26
PMPCBO75439 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.26
PMPCBO75439 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
PMPCBO75439 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
PMPCBO75439 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PMPCBO75439 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.64■□□□□ 0.25
PMPCBO75439 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.64■□□□□ 0.25
PMPCBO75439 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PMPCBO75439 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PMPCBO75439 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PMPCBO75439 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PMPCBO75439 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
PMPCBO75439 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PMPCBO75439 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PMPCBO75439 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PMPCBO75439 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
PMPCBO75439 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PMPCBO75439 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.64■□□□□ 0.25
PMPCBO75439 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PMPCBO75439 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
PMPCBO75439 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.64■□□□□ 0.25
PMPCBO75439 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.64■□□□□ 0.25
PMPCBO75439 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.64■□□□□ 0.25
PMPCBO75439 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PMPCBO75439 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.64■□□□□ 0.25
PMPCBO75439 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PMPCBO75439 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PMPCBO75439 AC092902.6-201ENST00000641783 218 ntBASIC16.64■□□□□ 0.25
PMPCBO75439 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PMPCBO75439 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PMPCBO75439 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.64■□□□□ 0.25
PMPCBO75439 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.64■□□□□ 0.25
PMPCBO75439 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PMPCBO75439 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PMPCBO75439 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PMPCBO75439 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.64■□□□□ 0.25
PMPCBO75439 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
PMPCBO75439 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.64■□□□□ 0.25
PMPCBO75439 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.64■□□□□ 0.25
PMPCBO75439 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PMPCBO75439 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.64■□□□□ 0.25
PMPCBO75439 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PMPCBO75439 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PMPCBO75439 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.64■□□□□ 0.25
PMPCBO75439 AC073439.1-201ENST00000624121 1774 ntBASIC16.64■□□□□ 0.25
PMPCBO75439 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.64■□□□□ 0.25
PMPCBO75439 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PMPCBO75439 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.63■□□□□ 0.25
PMPCBO75439 AL513523.2-202ENST00000427283 2040 ntBASIC16.63■□□□□ 0.25
PMPCBO75439 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.63■□□□□ 0.25
PMPCBO75439 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PMPCBO75439 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PMPCBO75439 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PMPCBO75439 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
PMPCBO75439 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PMPCBO75439 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms