Protein–RNA interactions for Protein: O43761

SYNGR3, Synaptogyrin-3, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3O43761 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SYNGR3O43761 STOM-202ENST00000347359 870 ntTSL 2 BASIC14.28□□□□□ -0.12
SYNGR3O43761 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SYNGR3O43761 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SYNGR3O43761 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SYNGR3O43761 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
SYNGR3O43761 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.28□□□□□ -0.12
SYNGR3O43761 SPDYE11-202ENST00000450699 704 ntBASIC14.28□□□□□ -0.12
SYNGR3O43761 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.28□□□□□ -0.12
SYNGR3O43761 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC14.28□□□□□ -0.12
SYNGR3O43761 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SYNGR3O43761 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SYNGR3O43761 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.28□□□□□ -0.12
SYNGR3O43761 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SYNGR3O43761 SPDYE9P-201ENST00000570642 692 ntBASIC14.28□□□□□ -0.12
SYNGR3O43761 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.28□□□□□ -0.12
SYNGR3O43761 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.28□□□□□ -0.12
SYNGR3O43761 AC004835.2-201ENST00000603762 682 ntBASIC14.28□□□□□ -0.12
SYNGR3O43761 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
SYNGR3O43761 AC026120.1-201ENST00000611536 926 ntBASIC14.28□□□□□ -0.12
SYNGR3O43761 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SYNGR3O43761 SPDYE10P-202ENST00000612005 668 ntBASIC14.28□□□□□ -0.12
SYNGR3O43761 SPDYE8P-202ENST00000612377 668 ntBASIC14.28□□□□□ -0.12
SYNGR3O43761 AL513210.1-201ENST00000629608 234 ntBASIC14.28□□□□□ -0.12
SYNGR3O43761 AC105339.1-204ENST00000636249 355 ntBASIC14.28□□□□□ -0.12
SYNGR3O43761 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SYNGR3O43761 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
SYNGR3O43761 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
SYNGR3O43761 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
SYNGR3O43761 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
SYNGR3O43761 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SYNGR3O43761 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.27□□□□□ -0.12
SYNGR3O43761 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SYNGR3O43761 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.27□□□□□ -0.12
SYNGR3O43761 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.27□□□□□ -0.12
SYNGR3O43761 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SYNGR3O43761 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
SYNGR3O43761 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
SYNGR3O43761 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.27□□□□□ -0.12
SYNGR3O43761 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
SYNGR3O43761 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
SYNGR3O43761 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SYNGR3O43761 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.27□□□□□ -0.12
SYNGR3O43761 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SYNGR3O43761 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SYNGR3O43761 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SYNGR3O43761 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SYNGR3O43761 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SYNGR3O43761 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
SYNGR3O43761 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.27□□□□□ -0.12
SYNGR3O43761 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC14.27□□□□□ -0.12
SYNGR3O43761 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.27□□□□□ -0.12
SYNGR3O43761 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SYNGR3O43761 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SYNGR3O43761 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SYNGR3O43761 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SYNGR3O43761 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SYNGR3O43761 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
SYNGR3O43761 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SYNGR3O43761 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.27□□□□□ -0.13
SYNGR3O43761 ADH5P3-201ENST00000433842 1137 ntBASIC14.27□□□□□ -0.13
SYNGR3O43761 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SYNGR3O43761 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC14.27□□□□□ -0.13
SYNGR3O43761 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.27□□□□□ -0.13
SYNGR3O43761 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
SYNGR3O43761 PRYP6-201ENST00000514804 343 ntBASIC14.27□□□□□ -0.13
SYNGR3O43761 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.27□□□□□ -0.13
SYNGR3O43761 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
SYNGR3O43761 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC14.27□□□□□ -0.13
SYNGR3O43761 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.27□□□□□ -0.13
SYNGR3O43761 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.27□□□□□ -0.13
SYNGR3O43761 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SYNGR3O43761 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.27□□□□□ -0.13
SYNGR3O43761 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.27□□□□□ -0.13
SYNGR3O43761 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SYNGR3O43761 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SYNGR3O43761 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.27□□□□□ -0.13
SYNGR3O43761 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC14.27□□□□□ -0.13
SYNGR3O43761 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.27□□□□□ -0.13
SYNGR3O43761 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SYNGR3O43761 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.27□□□□□ -0.13
SYNGR3O43761 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SYNGR3O43761 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SYNGR3O43761 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SYNGR3O43761 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SYNGR3O43761 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.27□□□□□ -0.13
SYNGR3O43761 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SYNGR3O43761 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.26□□□□□ -0.13
SYNGR3O43761 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
SYNGR3O43761 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.26□□□□□ -0.13
SYNGR3O43761 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
SYNGR3O43761 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SYNGR3O43761 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SYNGR3O43761 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SYNGR3O43761 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
SYNGR3O43761 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC14.26□□□□□ -0.13
SYNGR3O43761 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
SYNGR3O43761 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SYNGR3O43761 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.26□□□□□ -0.13
SYNGR3O43761 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms