Protein–RNA interactions for Protein: O14727

APAF1, Apoptotic protease-activating factor 1, humanhuman

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1O14727 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC21.51■■□□□ 1.03
APAF1O14727 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
APAF1O14727 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
APAF1O14727 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
APAF1O14727 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
APAF1O14727 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
APAF1O14727 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
APAF1O14727 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
APAF1O14727 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC21.5■■□□□ 1.03
APAF1O14727 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
APAF1O14727 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
APAF1O14727 CD81-202ENST00000381036 880 ntTSL 3 BASIC21.5■■□□□ 1.03
APAF1O14727 CBR1-202ENST00000399191 838 ntTSL 3 BASIC21.5■■□□□ 1.03
APAF1O14727 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
APAF1O14727 KRT18P32-201ENST00000424695 1287 ntBASIC21.5■■□□□ 1.03
APAF1O14727 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC21.5■■□□□ 1.03
APAF1O14727 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
APAF1O14727 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC21.5■■□□□ 1.03
APAF1O14727 SNHG9-202ENST00000564014 471 ntBASIC21.5■■□□□ 1.03
APAF1O14727 AP001160.2-201ENST00000596071 487 ntBASIC21.5■■□□□ 1.03
APAF1O14727 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC21.5■■□□□ 1.03
APAF1O14727 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC21.5■■□□□ 1.03
APAF1O14727 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
APAF1O14727 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
APAF1O14727 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
APAF1O14727 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
APAF1O14727 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
APAF1O14727 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC21.49■■□□□ 1.03
APAF1O14727 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC21.49■■□□□ 1.03
APAF1O14727 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC21.49■■□□□ 1.03
APAF1O14727 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC21.49■■□□□ 1.03
APAF1O14727 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
APAF1O14727 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
APAF1O14727 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
APAF1O14727 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC21.49■■□□□ 1.03
APAF1O14727 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
APAF1O14727 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
APAF1O14727 FAM220BP-201ENST00000377689 816 ntBASIC21.49■■□□□ 1.03
APAF1O14727 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
APAF1O14727 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
APAF1O14727 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
APAF1O14727 AC023141.5-201ENST00000458585 616 ntBASIC21.49■■□□□ 1.03
APAF1O14727 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
APAF1O14727 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC21.49■■□□□ 1.03
APAF1O14727 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC21.49■■□□□ 1.03
APAF1O14727 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
APAF1O14727 AC009093.7-201ENST00000623853 1223 ntBASIC21.49■■□□□ 1.03
APAF1O14727 AL513523.2-202ENST00000427283 2040 ntBASIC21.49■■□□□ 1.03
APAF1O14727 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC21.49■■□□□ 1.03
APAF1O14727 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC21.49■■□□□ 1.03
APAF1O14727 AC024909.3-201ENST00000611513 2257 ntBASIC21.49■■□□□ 1.03
APAF1O14727 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC21.49■■□□□ 1.03
APAF1O14727 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
APAF1O14727 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
APAF1O14727 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC21.49■■□□□ 1.03
APAF1O14727 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC21.49■■□□□ 1.03
APAF1O14727 OR6D1P-203ENST00000641209 4860 ntBASIC21.49■■□□□ 1.03
APAF1O14727 AC008741.2-201ENST00000612792 3115 ntBASIC21.49■■□□□ 1.03
APAF1O14727 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC21.48■■□□□ 1.03
APAF1O14727 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
APAF1O14727 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC21.48■■□□□ 1.03
APAF1O14727 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
APAF1O14727 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
APAF1O14727 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
APAF1O14727 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
APAF1O14727 AL139400.1-201ENST00000366220 510 ntBASIC21.48■■□□□ 1.03
APAF1O14727 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
APAF1O14727 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC21.48■■□□□ 1.03
APAF1O14727 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC21.48■■□□□ 1.03
APAF1O14727 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC21.48■■□□□ 1.03
APAF1O14727 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
APAF1O14727 RAB34-224ENST00000636513 888 ntTSL 5 BASIC21.48■■□□□ 1.03
APAF1O14727 AC010491.1-201ENST00000563101 2797 ntBASIC21.48■■□□□ 1.03
APAF1O14727 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
APAF1O14727 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
APAF1O14727 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
APAF1O14727 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
APAF1O14727 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
APAF1O14727 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
APAF1O14727 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
APAF1O14727 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
APAF1O14727 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
APAF1O14727 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
APAF1O14727 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
APAF1O14727 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC21.47■■□□□ 1.03
APAF1O14727 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
APAF1O14727 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
APAF1O14727 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
APAF1O14727 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
APAF1O14727 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC21.47■■□□□ 1.03
APAF1O14727 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
APAF1O14727 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
APAF1O14727 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
APAF1O14727 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC21.47■■□□□ 1.03
APAF1O14727 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC21.47■■□□□ 1.03
APAF1O14727 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
APAF1O14727 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
APAF1O14727 RBPMS2P1-201ENST00000437762 623 ntBASIC21.47■■□□□ 1.03
APAF1O14727 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC21.47■■□□□ 1.03
APAF1O14727 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms