Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
UPK2O00526 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
UPK2O00526 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
UPK2O00526 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UPK2O00526 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UPK2O00526 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UPK2O00526 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UPK2O00526 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
UPK2O00526 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
UPK2O00526 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
UPK2O00526 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UPK2O00526 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UPK2O00526 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UPK2O00526 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC13.16□□□□□ -0.3
UPK2O00526 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC13.16□□□□□ -0.3
UPK2O00526 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC13.16□□□□□ -0.3
UPK2O00526 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
UPK2O00526 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC13.16□□□□□ -0.3
UPK2O00526 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
UPK2O00526 AC079781.3-201ENST00000449110 356 ntBASIC13.16□□□□□ -0.3
UPK2O00526 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
UPK2O00526 POLD4-207ENST00000531239 584 ntTSL 2 BASIC13.16□□□□□ -0.3
UPK2O00526 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UPK2O00526 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC13.16□□□□□ -0.3
UPK2O00526 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC13.16□□□□□ -0.3
UPK2O00526 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC13.16□□□□□ -0.3
UPK2O00526 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UPK2O00526 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
UPK2O00526 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
UPK2O00526 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UPK2O00526 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC13.16□□□□□ -0.3
UPK2O00526 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UPK2O00526 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
UPK2O00526 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UPK2O00526 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC13.16□□□□□ -0.3
UPK2O00526 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UPK2O00526 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC13.16□□□□□ -0.3
UPK2O00526 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UPK2O00526 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UPK2O00526 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
UPK2O00526 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
UPK2O00526 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
UPK2O00526 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC13.16□□□□□ -0.3
UPK2O00526 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UPK2O00526 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
UPK2O00526 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC13.16□□□□□ -0.3
UPK2O00526 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC13.15□□□□□ -0.3
UPK2O00526 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
UPK2O00526 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC13.15□□□□□ -0.3
UPK2O00526 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
UPK2O00526 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
UPK2O00526 HLA-DQB2-231ENST00000435145 2026 ntBASIC13.15□□□□□ -0.3
UPK2O00526 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
UPK2O00526 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
UPK2O00526 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
UPK2O00526 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
UPK2O00526 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
UPK2O00526 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
UPK2O00526 AC004870.1-201ENST00000315132 882 ntBASIC13.15□□□□□ -0.3
UPK2O00526 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
UPK2O00526 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
UPK2O00526 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
UPK2O00526 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC13.15□□□□□ -0.3
UPK2O00526 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
UPK2O00526 VN2R19P-201ENST00000442399 1052 ntBASIC13.15□□□□□ -0.3
UPK2O00526 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
UPK2O00526 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC13.15□□□□□ -0.3
UPK2O00526 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
UPK2O00526 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC13.15□□□□□ -0.3
UPK2O00526 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
UPK2O00526 TCAP-202ENST00000578283 583 ntTSL 5 BASIC13.15□□□□□ -0.3
UPK2O00526 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
UPK2O00526 CALM3-211ENST00000598871 561 ntTSL 4 BASIC13.15□□□□□ -0.3
UPK2O00526 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
UPK2O00526 PRKN-208ENST00000610470 531 ntTSL 2 BASIC13.15□□□□□ -0.3
UPK2O00526 PRKN-209ENST00000612485 225 ntTSL 5 BASIC13.15□□□□□ -0.3
UPK2O00526 AL773604.1-201ENST00000617417 272 ntBASIC13.15□□□□□ -0.3
UPK2O00526 AL691432.3-201ENST00000621860 400 ntBASIC13.15□□□□□ -0.3
UPK2O00526 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
UPK2O00526 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
UPK2O00526 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
UPK2O00526 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC13.15□□□□□ -0.3
UPK2O00526 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
UPK2O00526 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
UPK2O00526 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
UPK2O00526 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC13.15□□□□□ -0.3
UPK2O00526 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
UPK2O00526 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
UPK2O00526 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
UPK2O00526 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
UPK2O00526 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
UPK2O00526 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC13.15□□□□□ -0.3
UPK2O00526 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
UPK2O00526 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.31
UPK2O00526 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
UPK2O00526 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC13.15□□□□□ -0.31
UPK2O00526 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.31
UPK2O00526 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC13.15□□□□□ -0.31
UPK2O00526 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
UPK2O00526 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms